RegulonDB RegulonDB 11.1: Gene Form
   

phnI gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

phnI phnJ phnK phnH phnG

Gene      
Name: phnI    Texpresso search in the literature
Synonym(s): ECK4092, EG10718, b4099
Genome position(nucleotides): 4319599 <-- 4320663
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 62.63
External database links:  
ASAP:
 ABE-0013428
CGSC:
 34538
ECHOBASE:
 EB0712
ECOLIHUB:
 phnI
OU-MICROARRAY:
 b4099
STRING:
 511145.b4099
COLOMBOS: phnI


Product      
Name: carbon-phosphorus lyase core complex subunit PhnI
Synonym(s): PhnI, PhnI subunit of methylphosphonate degradation complex
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 38.853
Isoelectric point: 4.685
Motif(s):
 
Type Positions Sequence Comment
1 -> 350 MYVAVKGGEKAIDAAHALQESRRRGDTDLPELSVAQIEQQLNLAVDRVMTEGGIADRELAALALKQASGDNVEAIFLLRAYRTTLAKLAVSEPLDTTGMRLERRISAVYKDIPGGQLLGPTYDYTHRLLDFTLLANGEAPTLTTADSEQQPSPHVFSLLARQGLAKFEEDSGAQPDDITRTPPVYPCSRSSRLQQLMRGDEGYLLALAYSTQRGYGRNHPFAGEIRSGYIDVSIVPEELGFAVNVGELLMTECEMVNGFIDPPGEPPHFTRGYGLVFGMSERKAMAMALVDRALQAPEYGEHATGPAQDEEFVLAHADNVEAAGFVSHLKLPHYVDFQAELELLKRLQQE
264 -> 264 G UniProt: In strain: B..
351 -> 351 Q UniProt: In strain: B..

 
Classification:
Multifun Terms (GenProtEC)  
  1 - metabolism --> 1.8 - metabolism of other compounds --> 1.8.1 - phosphorous metabolism
Gene Ontology Terms (GO)  
cellular_component GO:1904176 - carbon phosphorus lyase complex
GO:0005829 - cytosol
GO:0061694 - alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase complex
molecular_function GO:0005515 - protein binding
GO:0016740 - transferase activity
GO:0061693 - alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
biological_process GO:0015716 - organic phosphonate transport
GO:0019634 - organic phosphonate metabolic process
GO:0019700 - organic phosphonate catabolic process
Note(s): Note(s): ...[more].
Evidence: [EXP-IMP] Inferred from mutant phenotype
Reference(s): [1] Metcalf WW., et al., 1993
External database links:  
ALPHAFOLD:
 P16687
DIP:
 DIP-10488N
ECOCYC:
 EG10718-MONOMER
ECOLIWIKI:
 b4099
INTERPRO:
 IPR008773
PDB:
 4XB6
PFAM:
 PF05861
PRIDE:
 P16687
PRODB:
 PRO_000023535
REFSEQ:
 NP_418523
SMR:
 P16687
UNIPROT:
 P16687


Operon      
Name: phnCDEFGHIJKLMNOP         
Operon arrangement:
Transcription unit        Promoter
phnCDEEFGHIJKLMNOP
phnLMNOP


Transcriptional Regulation      
Display Regulation             
Activated by: PhoB


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References


Reference(s)    

 [1] Metcalf WW., Wanner BL., 1993, Mutational analysis of an Escherichia coli fourteen-gene operon for phosphonate degradation, using TnphoA' elements., J Bacteriol 175(11):3430-42

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