RegulonDB RegulonDB 11.1: Gene Form
   

phnJ gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

phnI phnJ phnK phnL phnH phnM phnG

Gene      
Name: phnJ    Texpresso search in the literature
Synonym(s): ECK4091, EG10719, b4098
Genome position(nucleotides): 4318761 <-- 4319606
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 58.27
External database links:  
ASAP:
 ABE-0013426
CGSC:
 34535
ECHOBASE:
 EB0713
ECOLIHUB:
 phnJ
OU-MICROARRAY:
 b4098
STRING:
 511145.b4098
COLOMBOS: phnJ


Product      
Name: carbon-phosphorus lyase core complex subunit PhnJ
Synonym(s): PhnJ
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 31.845
Isoelectric point: 4.825
Motif(s):
 
Type Positions Sequence Comment
6 -> 276 GYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGESDVLKVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDATVIQTRHRIPETPLTEDQIIIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGRYVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDEPCAICGSTHSYLDEVVLDDAGNRMFVCSDTDYCRQQS
103 -> 103 V UniProt: In strain: B..

 
Classification:
Multifun Terms (GenProtEC)  
  1 - metabolism --> 1.8 - metabolism of other compounds --> 1.8.1 - phosphorous metabolism
Gene Ontology Terms (GO)  
cellular_component GO:1904176 - carbon phosphorus lyase complex
GO:0005829 - cytosol
GO:0061694 - alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase complex
molecular_function GO:0005515 - protein binding
GO:0016829 - lyase activity
GO:0046872 - metal ion binding
GO:0051536 - iron-sulfur cluster binding
GO:0051539 - 4 iron, 4 sulfur cluster binding
GO:0098848 - alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase activity
biological_process GO:0015716 - organic phosphonate transport
GO:0019634 - organic phosphonate metabolic process
GO:0019700 - organic phosphonate catabolic process
Note(s): Note(s): ...[more].
External database links:  
ALPHAFOLD:
 P16688
DIP:
 DIP-10489N
ECOCYC:
 EG10719-MONOMER
ECOLIWIKI:
 b4098
INTERPRO:
 IPR010306
PDB:
 4XB6
PFAM:
 PF06007
PRIDE:
 P16688
PRODB:
 PRO_000023536
REFSEQ:
 NP_418522
SMR:
 P16688
UNIPROT:
 P16688


Operon      
Name: phnCDEFGHIJKLMNOP         
Operon arrangement:
Transcription unit        Promoter
phnCDEEFGHIJKLMNOP
phnLMNOP


Transcriptional Regulation      
Display Regulation             
Activated by: PhoB


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



RegulonDB