RegulonDB RegulonDB 10.8: Gene Form
   

recC gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

recC ptrA ppdC ygdB recB LexA recCp recCp ptrAp ptrAp

Gene      
Name: recC    Texpresso search in the literature
Synonym(s): ECK2818, EG10825, b2822
Genome position(nucleotides): 2959060 <-- 2962428 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
53.61
External database links:  
ASAP:
ABE-0009255
CGSC:
310
ECHOBASE:
EB0818
OU-MICROARRAY:
b2822
PortEco:
recC
STRING:
511145.b2822
COLOMBOS: recC


Product      
Name: exodeoxyribonuclease V subunit RecC
Synonym(s): RecC
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 128.847
Isoelectric point: 4.622
Motif(s):
 
Type Positions Sequence
64 -> 64 L
705 -> 705 D
134 -> 134 L
142 -> 142 R
1078 -> 1081 NMMV

 

Classification:
Multifun Terms (GenProtEC)  
  1 - metabolism --> 1.2 - degradation of macromolecules --> 1.2.2 - DNA
  2 - information transfer --> 2.1 - DNA related --> 2.1.3 - DNA recombination
  2 - information transfer --> 2.1 - DNA related --> 2.1.4 - DNA repair
  2 - information transfer --> 2.1 - DNA related --> 2.1.5 - DNA degradation
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
GO:0009338 - exodeoxyribonuclease V complex
molecular_function GO:0003677 - DNA binding
GO:0003678 - DNA helicase activity
GO:0004386 - helicase activity
GO:0004518 - nuclease activity
GO:0004527 - exonuclease activity
GO:0005515 - protein binding
GO:0016787 - hydrolase activity
GO:0000166 - nucleotide binding
GO:0005524 - ATP binding
GO:0008854 - exodeoxyribonuclease V activity
biological_process GO:0006281 - DNA repair
GO:0006310 - DNA recombination
GO:0006974 - cellular response to DNA damage stimulus
GO:0009314 - response to radiation
GO:0032508 - DNA duplex unwinding
GO:0090305 - nucleic acid phosphodiester bond hydrolysis
GO:0000724 - double-strand break repair via homologous recombination
GO:0044355 - clearance of foreign intracellular DNA
Note(s): Note(s): ...[more].
Reference(s): [1] Hickson ID., et al., 1985
[2] Salmon K., et al., 2003
External database links:  
DIP:
DIP-10650N
ECOCYC:
EG10825-MONOMER
ECOLIWIKI:
b2822
INTERPRO:
IPR041500
INTERPRO:
IPR027417
INTERPRO:
IPR013986
INTERPRO:
IPR011335
INTERPRO:
IPR006697
MINT:
P07648
MODBASE:
P07648
PDB:
5MBV
PDB:
3K70
PDB:
1W36
PDB:
5LD2
PFAM:
PF17946
PRIDE:
P07648
PRODB:
PRO_000023698
REFSEQ:
NP_417299
SMR:
P07648
UNIPROT:
P07648


Operon      
Name: ppdAB-ygdB-ppdC-recC         
Operon arrangement:
Transcription unit        Promoter
recC
ppdAB-ygdB-ppdC-recC


Transcriptional Regulation      
Display Regulation             
Activated by: FlhDC


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References


Reference(s)    

 [1] Hickson ID., Robson CN., Atkinson KE., Hutton L., Emmerson PT., 1985, Reconstitution of RecBC DNase activity from purified Escherichia coli RecB and RecC proteins., J Biol Chem 260(2):1224-9

 [2] Salmon K., Hung SP., Mekjian K., Baldi P., Hatfield GW., Gunsalus RP., 2003, Global gene expression profiling in Escherichia coli K12. The effects of oxygen availability and FNR., J Biol Chem 278(32):29837-55


RegulonDB