RegulonDB

Gene
Name:	ugpA
Synonym(s):	ECK3436, EG11046, b3452, psiB, psiC, ugp
Genome position(nucleotides):	3590024 <-- 3590911
Strand:	reverse
Sequence:	Get nucleotide sequence FastaFormat
GC content %:	55.86
External database links:

ASAP:	ABE-0011272
CGSC:	40
ECHOBASE:	EB1039
ECOLIHUB:	ugpA
OU-MICROARRAY:	b3452
STRING:	511145.b3452
COLOMBOS:	ugpA

Product

Name:

sn-glycerol 3-phosphate ABC transporter membrane subunit UgpA

Synonym(s):

PsiB, PsiC, Ugp, UgpA

Sequence:

Get amino acid sequence Fasta Format

Cellular location:

inner membrane

Molecular weight:

33.264

Isoelectric point:

9.033

Motif(s):

Type	Positions	Sequence	Comment
	12 -> 32	WLPYLLVAPQLIITVIFFIWP	UniProt: Helical.
	76 -> 284	IKFSTFVTVSGLLVSLFFAALVEYIVRGSRFYQTLMLLPYAVAPAVAAVLWIFLFNPGRGLITHFLAEFGYDWNHAQNSGQAMFLVVFASVWKQISYNFLFFYAALQSIPRSLIEAAAIDGAGPIRRFFKIALPLIAPVSFFLLVVNLVYAFFDTFPVIDAATSGGPVQATTTLIYKIYREGFTGLDLASSAAQSVVLMFLVIVLTVVQ	UniProt: ABC transmembrane type-1.
	81 -> 101	FVTVSGLLVSLFFAALVEYIV	UniProt: Helical.
	88 -> 293	LVSLFFAALVEYIVRGSRFYQTLMLLPYAVAPAVAAVLWIFLFNPGRGLITHFLAEFGYDWNHAQNSGQAMFLVVFASVWKQISYNFLFFYAALQSIPRSLIEAAAIDGAGPIRRFFKIALPLIAPVSFFLLVVNLVYAFFDTFPVIDAATSGGPVQATTTLIYKIYREGFTGLDLASSAAQSVVLMFLVIVLTVVQFRYVESKVR
	110 -> 130	LMLLPYAVAPAVAAVLWIFLF	UniProt: Helical.

Classification:

Multifun Terms (GenProtEC)
		1 - metabolism --> 1.8 - metabolism of other compounds --> 1.8.1 - phosphorous metabolism
		6 - cell structure --> 6.1 - membrane
		4 - transport --> 4.3 - Primary Active Transporters --> 4.3.A - Pyrophosphate Bond (ATP; GTP; P2) Hydrolysis-driven Active Transporters --> 4.3.A.1 - The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases --> 4.3.A.1.m - ABC superfamily, membrane component
Gene Ontology Terms (GO)
	cellular_component	GO:1902517 - glycerol-3-phosphate-transporting ATPase complex GO:0016020 - membrane GO:0005886 - plasma membrane GO:0005887 - integral component of plasma membrane GO:0016021 - integral component of membrane GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
	molecular_function	GO:0015169 - glycerol-3-phosphate transmembrane transporter activity GO:0001406 - glycerophosphodiester transmembrane transporter activity
	biological_process	GO:0015794 - glycerol-3-phosphate transmembrane transport GO:0055085 - transmembrane transport GO:0001407 - glycerophosphodiester transmembrane transport

Note(s):

Note(s): ...[more].

External database links:

ALPHAFOLD:

DIP:

ECOCYC:

ECOLIWIKI:

INTERPRO:

INTERPRO:

PFAM:

PRIDE:

PRODB:

PROSITE:

REFSEQ:

UNIPROT:

Operon

Name:

ugpBAECQ

Operon arrangement:

Transcription unit	Promoter
ugpBAECQ	ugpBp1
ugpBAECQ	ugpBp2

Transcriptional Regulation
	Display Regulation
Activated by:	CRP, PhoB
Repressed by:	PhoB

RNA cis-regulatory element

Attenuation:	Translational

Elements in the selected gene context region unrelated to any object in RegulonDB

	Type	Name	Post Left	Post Right	Strand	Notes	Evidence (Confirmed, Strong, Weak)	References
	promoter	ugpQp1	3588300		reverse	nd	[COMP-AINF]	[1]

Evidence
[COMP-AINF] Inferred computationally without human oversight

Reference(s)
[1] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78