RegulonDB RegulonDB 10.10: Gene Form
   

yigG gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

rarD yigG yigF yigFp4 yigFp4 yigFp5 yigFp5

Gene      
Name: yigG    Texpresso search in the literature
Synonym(s): ECK3812, EG11465, b3818
Genome position(nucleotides): 4002813 <-- 4003193 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 32.81
External database links:  
ASAP:
 ABE-0012468
ECHOBASE:
 EB1433
ECOLIHUB:
 yigG
OU-MICROARRAY:
 b3818
STRING:
 511145.b3818
COLOMBOS: yigG


Product      
Name: inner membrane protein
Synonym(s): YigG
Sequence: Get amino acid sequence Fasta Format
Cellular location: inner membrane
Molecular weight: 14.408
Isoelectric point: 8.829
Motif(s):
 
Type Positions Sequence
101 -> 121 GSMIFLICYFSTFSMLMLAPT
41 -> 61 AGFLVIVSTIVLHYLVINMNC
19 -> 39 IFSFILINFIFAFLIIFFNDG
68 -> 88 GFIYIKTYVFGTLAVYIISII

 
Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
cellular_component GO:0016020 - membrane
GO:0005886 - plasma membrane
GO:0005887 - integral component of plasma membrane
GO:0016021 - integral component of membrane
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
 EG11465-MONOMER
ECOLIWIKI:
 b3818
PRIDE:
 P27843
REFSEQ:
 NP_418262
UNIPROT:
 P27843


Operon      
Name: yigGF         
Operon arrangement:
Transcription unit        Promoter
yigGF


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter yigFp5 4002842 reverse nd [ICWHO] [1]
  promoter yigFp4 4002875 reverse nd [ICWHO] [1]


Evidence    

 [ICWHO] Inferred computationally without human oversight


Reference(s)    

 [1] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78

RegulonDB