RegulonDB RegulonDB 10.9: Gene Form
   

prfH gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

pepD prfH yafP ykfJ

Gene      
Name: prfH    Texpresso search in the literature
Synonym(s): ECK0237, EG11496, b0236
Type: Pseudo Gene
Genome position(nucleotides): 253702 --> 254202 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
54.29
External database links:  
ASAP:
ABE-0000807
ECHOBASE:
EB1459
ECOLIHUB:
prfH
OU-MICROARRAY:
b0236
STRING:
316407.85674391
COLOMBOS: prfH


Product      
Name: putative peptide chain release factor
Sequence: Get amino acid sequence Fasta Format
Isoelectric point: 9.97
Motif(s):
 
Type Positions Sequence
129 -> 132 QQQQ

 

Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
Note(s): Note(s): ...[more].
Evidence: [HIFS] Human inference of function from sequence
Reference(s): [1] Pel HJ., et al., 1992
External database links:  
ECOCYC:
EG11496-MONOMER
ECOLIWIKI:
b0236
INTERPRO:
IPR000352
INTERPRO:
IPR017509
MODBASE:
P28369
PANTHER:
PTHR43804:SF5
PFAM:
PF00472
PRIDE:
P28369
PROSITE:
PS00745
REFSEQ:
NP_414771
SMR:
P28369
SWISSMODEL:
P28369
UNIPROT:
P28369


Operon      
Name: ykfJ-prfH         
Operon arrangement:
Transcription unit        Promoter
ykfJ-prfH


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References


Reference(s)    

 [1] Pel HJ., Rep M., Grivell LA., 1992, Sequence comparison of new prokaryotic and mitochondrial members of the polypeptide chain release factor family predicts a five-domain model for release factor structure., Nucleic Acids Res 20(17):4423-8


RegulonDB