RegulonDB RegulonDB 11.2: Gene Form
   

atoE gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

atoE atoB atoD atoA

Gene      
Name: atoE    Texpresso search in the literature
Synonym(s): ECK2216, EG11671, b2223
Genome position(nucleotides): 2324756 --> 2326078
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 53.06
External database links:  
ASAP:
 ABE-0007353
CGSC:
 37064
ECHOBASE:
 EB1622
ECOLIHUB:
 atoE
OU-MICROARRAY:
 b2223
STRING:
 511145.b2223
COLOMBOS: atoE


Product      
Name: short chain fatty acid transporter
Synonym(s): AtoE, putative short chain fatty acid transporter
Sequence: Get amino acid sequence Fasta Format
Cellular location: inner membrane
Molecular weight: 47.528
Isoelectric point: 8.463
Motif(s):
 
Type Positions Sequence Comment
1 -> 440 MIGRISRFMTRFVSRWLPDPLIFAMLLTLLTFVIALWLTPQTPISMVKMWGDGFWNLLAFGMQMALIIVTGHALASSAPVKSLLRTAASAAKTPVQGVMLVTFFGSVACVINWGFGLVVGAMFAREVARRVPGSDYPLLIACAYIGFLTWGGGFSGSMPLLAATPGNPVEHIAGLIPVGDTLFSGFNIFITVALIVVMPFITRMMMPKPSDVVSIDPKLLMEEADFQKQLPKDAPPSERLEESRILTLIIGALGIAYLAMYFSEHGFNITINTVNLMFMIAGLLLHKTPMAYMRAISAAARSTAGILVQFPFYAGIQLMMEHSGLGGLITEFFINVANKDTFPVMTFFSSALINFAVPSGGGHWVIQGPFVIPAAQALGADLGKSVMAIAYGEQWMNMAQPFWALPALAIAGLGVRDIMGYCITALLFSGVIFVIGLTLF
20 -> 40 PLIFAMLLTLLTFVIALWLTP UniProt: Helical.
54 -> 74 FWNLLAFGMQMALIIVTGHAL UniProt: Helical.
103 -> 123 FFGSVACVINWGFGLVVGAMF UniProt: Helical.
138 -> 158 LLIACAYIGFLTWGGGFSGSM UniProt: Helical.

 
Classification:
Multifun Terms (GenProtEC)  
  4 - transport --> 4.9.B - Putative uncharacterized transport protein
Gene Ontology Terms (GO)  
cellular_component GO:0016020 - membrane
GO:0005886 - plasma membrane
GO:0016021 - integral component of membrane
Note(s): Note(s): ...[more].
External database links:  
ALPHAFOLD:
 P76460
ECOCYC:
 EG11671-MONOMER
ECOLIWIKI:
 b2223
INTERPRO:
 IPR006160
INTERPRO:
 IPR006161
PANTHER:
 PTHR41983
PFAM:
 PF02667
PRIDE:
 P76460
PRODB:
 PRO_000022184
REFSEQ:
 NP_416727
UNIPROT:
 P76460


Operon      
Name: atoDAEB         
Operon arrangement:
Transcription unit        Promoter
atoDAEB


Transcriptional Regulation      
Display Regulation             
Activated by: AtoC, IHF


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



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