RegulonDB RegulonDB 10.9: Gene Form
   

nepI gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

nepI yicN yicS SoxS terminator nepIp nepIp

Gene      
Name: nepI    Texpresso search in the literature
Synonym(s): ECK3653, EG11689, b3662, yicM
Genome position(nucleotides): 3840549 <-- 3841739 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
52.98
External database links:  
ASAP:
ABE-0011967
ECHOBASE:
EB1640
ECOLIHUB:
nepI
OU-MICROARRAY:
b3662
STRING:
511145.b3662
COLOMBOS: nepI


Product      
Name: purine ribonucleoside exporter
Synonym(s): NepI, NepI MFS ribonucleoside transporter, YicM
Sequence: Get amino acid sequence Fasta Format
Cellular location: inner membrane
Molecular weight: 41.842
Isoelectric point: 9.984
Motif(s):
 
Type Positions Sequence
158 -> 158 V
176 -> 196 VFNAAAVMGVLCIFWIIKSLP
293 -> 293 V
148 -> 168 VIFGAVSIALVIAAPLGSFLG
367 -> 387 IGLTSPLMLSGTLMLLTALLV

 

Classification:
Multifun Terms (GenProtEC)  
  4 - transport --> 4.2 - Electrochemical potential driven transporters --> 4.2.A - Porters (Uni-, Sym- and Antiporters)
  6 - cell structure --> 6.1 - membrane
Gene Ontology Terms (GO)  
cellular_component GO:0016020 - membrane
GO:0005886 - plasma membrane
GO:0016021 - integral component of membrane
molecular_function GO:0022857 - transmembrane transporter activity
GO:0015211 - purine nucleoside transmembrane transporter activity
biological_process GO:0055085 - transmembrane transport
GO:0015860 - purine nucleoside transmembrane transport
Note(s): Note(s): ...[more].
External database links:  
DIP:
DIP-48180N
ECOCYC:
YICM-MONOMER
ECOLIWIKI:
b3662
INTERPRO:
IPR023680
INTERPRO:
IPR020846
INTERPRO:
IPR011701
INTERPRO:
IPR036259
MODBASE:
P0ADL1
PFAM:
PF07690
PRIDE:
P0ADL1
PRODB:
PRO_000023371
PROSITE:
PS50850
REFSEQ:
NP_418118
UNIPROT:
P0ADL1


Operon      
Name: nepI         
Operon arrangement:
Transcription unit        Promoter
nepI


Transcriptional Regulation      
Display Regulation             
Activated by: SoxS


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



RegulonDB