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Gene | ![]() ![]() |
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Name: | rpnC ![]() |
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Synonym(s): | ECK0131, EG11748, b0132, yadD | |
Genome position(nucleotides): | 146968 --> 147870 | |
Strand: | forward | |
Sequence: | Get nucleotide sequence FastaFormat | |
GC content %: |
48.84 | |
External database links: | ||
ASAP: |
ABE-0000463 | |
ECHOBASE: |
EB1698 | |
ECOLIHUB: |
yadD | |
OU-MICROARRAY: |
b0132 | |
STRING: |
511145.b0132 | |
COLOMBOS: | rpnC |
Product | ![]() ![]() |
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Name: | recombination-promoting nuclease RpnC | ||||||||||||||
Synonym(s): | RpnC, YadD | ||||||||||||||
Sequence: | Get amino acid sequence Fasta Format | ||||||||||||||
Cellular location: | cytosol | ||||||||||||||
Molecular weight: | 34.607 | ||||||||||||||
Isoelectric point: | 5.092 | ||||||||||||||
Motif(s): | |||||||||||||||
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Classification: |
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Note(s): | Note(s): ...[more]. | ||||||||||||||
Evidence: | [EXP-IMP] Inferred from mutant phenotype | ||||||||||||||
Reference(s): |
[1] Kingston AW., et al., 2017 [2] Meydan S., et al., 2019 |
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External database links: | |||||||||||||||
ALPHAFOLD: |
P31665 | ||||||||||||||
ECOCYC: |
EG11748-MONOMER | ||||||||||||||
ECOLIWIKI: |
b0132 | ||||||||||||||
INTERPRO: |
IPR006842 | ||||||||||||||
INTERPRO: |
IPR010106 | ||||||||||||||
PFAM: |
PF04754 | ||||||||||||||
PRIDE: |
P31665 | ||||||||||||||
REFSEQ: |
NP_414674 | ||||||||||||||
SMR: |
P31665 | ||||||||||||||
UNIPROT: |
P31665 | ||||||||||||||
Elements in the selected gene context region unrelated to any object in RegulonDB | ![]() ![]() |
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Type | Name | Post Left | Post Right | Strand | Notes | Evidence (Confirmed, Strong, Weak) | References | |
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promoter | yadDp3 | 146898 | forward | nd | [COMP-AINF] | [3] | ||
promoter | yadDp5 | 146957 | forward | nd | [COMP-AINF] | [3] | ||
promoter | yadDp4 | 146959 | forward | nd | [COMP-AINF] | [3] | ||
promoter | TSS_271 | 147583 | forward | nd | [RS-EPT-CBR] | [4] |
Reference(s) |
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