RegulonDB RegulonDB 10.9: Gene Form
   

yjbG gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

yjbH yjbG yjbF yjbT yjbE

Gene      
Name: yjbG    Texpresso search in the literature
Synonym(s): ECK4020, EG11925, b4028
Genome position(nucleotides): 4236897 --> 4237634 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
58.67
External database links:  
ASAP:
ABE-0013174
ECHOBASE:
EB1869
ECOLIHUB:
yjbG
OU-MICROARRAY:
b4028
STRING:
511145.b4028
COLOMBOS: yjbG


Product      
Name: capsule biosynthesis GfcC family protein YjbG
Synonym(s): YjbG
Sequence: Get amino acid sequence Fasta Format
Molecular weight: 26.281
Isoelectric point: 7.673
Motif(s):
 
Type Positions Sequence
1 -> 20 MIKQTIVALLLSVGASSVFA
19 -> 245 FAAGTVKVFSNGSSEAKTLTGAEHLIDLVGQPRLANSWWPGAVISEELATAAALRQQQALLTRLAEQGADSSADDAAAINALRQQIQALKVTGRQKINLDPDIVRVAERGNPPLQGNYTLWVGPPPSTVTLFGLISRPGKQPFTPGRDVASYLSDQSLLSGADRSYAWVVYPDGRTQKAPVAYWNKRHVEPMPGSIIYVGLADSVWSETPDALNADILQTLTQRIPQ
21 -> 245 AGTVKVFSNGSSEAKTLTGAEHLIDLVGQPRLANSWWPGAVISEELATAAALRQQQALLTRLAEQGADSSADDAAAINALRQQIQALKVTGRQKINLDPDIVRVAERGNPPLQGNYTLWVGPPPSTVTLFGLISRPGKQPFTPGRDVASYLSDQSLLSGADRSYAWVVYPDGRTQKAPVAYWNKRHVEPMPGSIIYVGLADSVWSETPDALNADILQTLTQRIPQ

 

Classification:
Multifun Terms (GenProtEC)  
  1 - metabolism --> 1.6 - biosynthesis of macromolecules (cellular constituents)
Gene Ontology Terms (GO)  
biological_process GO:0045226 - extracellular polysaccharide biosynthetic process
Note(s): Note(s): ...[more].
Evidence: [IMP] Inferred from mutant phenotype
Reference(s): [1] Ferrieres L., et al., 2007
External database links:  
ECOCYC:
EG11925-MONOMER
ECOLIWIKI:
b4028
INTERPRO:
IPR010425
PFAM:
PF06251
PRIDE:
P32688
REFSEQ:
NP_418452
SMR:
P32688
UNIPROT:
P32688


Operon      
Name: yjbEFGH         
Operon arrangement:
Transcription unit        Promoter
yjbE
yjbEFGH
yjbEFGH
yjbFGH


Transcriptional Regulation      
Display Regulation             
Activated by: IHF, RcsAB


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References


Reference(s)    

 [1] Ferrieres L., Aslam SN., Cooper RM., Clarke DJ., 2007, The yjbEFGH locus in Escherichia coli K-12 is an operon encoding proteins involved in exopolysaccharide production., Microbiology 153(Pt 4):1070-80


RegulonDB