Gene
Name:	rsuA
Synonym(s):	ECK2177, EG12044, b2183, yejD
Genome position(nucleotides):	2279788 <-- 2280483
Strand:	reverse
Sequence:	Get nucleotide sequence FastaFormat
GC content %:	52.87
External database links:

ASAP:	ABE-0007223
CGSC:	36034
ECHOBASE:	EB1978
ECOLIHUB:	rsuA
OU-MICROARRAY:	b2183
STRING:	511145.b2183
COLOMBOS:	rsuA

Type	Name	Post Left	Strand	Notes	Evidence (Confirmed, Strong, Weak)	References
promoter	TSS_2478	2279068	reverse	nd	[RS-EPT-CBR]	[4]
promoter	rsuAp2	2280545	reverse	nd	[COMP-AINF]	[5]
promoter	rsuAp3	2280548	reverse	nd	[COMP-AINF]	[5]
promoter	TSS_2479	2280608	forward	nd	[RS-EPT-CBR]	[4]

Evidence
[RS-EPT-CBR] RNA-seq using two enrichment strategies for primary transcripts and consistent biological replicates
[COMP-AINF] Inferred computationally without human oversight

Reference(s)
[1] Koonin EV., 1996, Pseudouridine synthases: four families of enzymes containing a putative uridine-binding motif also conserved in dUTPases and dCTP deaminases., Nucleic Acids Res 24(12):2411-5
[2] Lee K., Holland-Staley CA., Cunningham PR., 2001, Genetic approaches to studying protein synthesis: effects of mutations at Psi516 and A535 in Escherichia coli 16S rRNA., J Nutr 131(11):2994S-3004S
[3] Mueller EG., 2002, Chips off the old block., Nat Struct Biol 9(5):320-2
[4] Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muñiz-Rascado L, García-Sotelo JS, Weiss V, Solano-Lira H, Martínez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernández S, Alquicira-Hernández K, López-Fuentes A, Porrón-Sotelo L, Huerta AM, Bonavides-Martínez C, Balderas-Martínez YI, Pannier L, Olvera M, Labastida A, Jiménez-Jacinto V, Vega-Alvarado L, Del Moral-Chávez V, Hernández-Alvarez A, Morett E, Collado-Vides J., 2012, RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more., Nucleic Acids Res.
[5] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78

RNA cis-regulatory element

Attenuation:	Translational