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Gene | ![]() ![]() |
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Name: | ppdD ![]() |
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Synonym(s): | ECK0107, EG12107, b0108 | |
Genome position(nucleotides): | 117109 <-- 117549 | |
Strand: | reverse | |
Sequence: | Get nucleotide sequence FastaFormat | |
GC content %: |
53.06 | |
External database links: | ||
ASAP: |
ABE-0000372 | |
ECHOBASE: |
EB2031 | |
ECOLIHUB: |
ppdD | |
OU-MICROARRAY: |
b0108 | |
STRING: |
511145.b0108 | |
COLOMBOS: | ppdD |
Product | ![]() ![]() |
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Name: | prepilin-type N-terminal cleavage/methylation domain-containing protein PpdD | ||||||||||||||||
Synonym(s): | PpdD, prepilin peptidase dependent protein | ||||||||||||||||
Sequence: | Get amino acid sequence Fasta Format | ||||||||||||||||
Cellular location: | extracellular space,pilus,membrane | ||||||||||||||||
Molecular weight: | 15.622 | ||||||||||||||||
Isoelectric point: | 4.393 | ||||||||||||||||
Motif(s): | |||||||||||||||||
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Classification: |
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Note(s): | Note(s): ...[more]. | ||||||||||||||||
Reference(s): |
[1] Cisneros DA., et al., 2012 [2] Sauvonnet N., et al., 2000 |
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External database links: | |||||||||||||||||
ALPHAFOLD: |
P36647 | ||||||||||||||||
ECOCYC: |
EG12107-MONOMER | ||||||||||||||||
ECOLIWIKI: |
b0108 | ||||||||||||||||
INTERPRO: |
IPR012902 | ||||||||||||||||
MODBASE: |
P36647 | ||||||||||||||||
PFAM: |
PF07963 | ||||||||||||||||
PRIDE: |
P36647 | ||||||||||||||||
PROSITE: |
PS00409 | ||||||||||||||||
REFSEQ: |
NP_414650 | ||||||||||||||||
UNIPROT: |
P36647 | ||||||||||||||||
RNA cis-regulatory element | ![]() |
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Attenuation: | Translational |
Elements in the selected gene context region unrelated to any object in RegulonDB | ![]() ![]() |
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Type | Name | Post Left | Post Right | Strand | Notes | Evidence (Confirmed, Strong, Weak) | References | |
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promoter | TSS_232 | 118078 | reverse | nd | [RS-EPT-CBR] | [3] |
Reference(s) |
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