![]() ![]() ![]() ![]() |
Gene | ![]() ![]() |
|
---|---|---|
Name: | thpR ![]() |
|
Synonym(s): | ECK0146, EG12330, b0147, ligT, yadP | |
Genome position(nucleotides): | 161501 <-- 162031 Genome Browser | |
Strand: | reverse | |
Sequence: | Get nucleotide sequence FastaFormat | |
GC content %: |
55.93 | |
External database links: | ||
ASAP: |
ABE-0000505 | |
ECHOBASE: |
EB2234 | |
ECOLIHUB: |
ligT | |
OU-MICROARRAY: |
b0147 | |
STRING: |
511145.b0147 | |
COLOMBOS: | thpR |
Product | ![]() ![]() |
||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Name: | RNA 2',3'-cyclic phosphodiesterase | ||||||||||||||||||
Synonym(s): | LigT, ThpR, YadP | ||||||||||||||||||
Sequence: | Get amino acid sequence Fasta Format | ||||||||||||||||||
Cellular location: | cytosol | ||||||||||||||||||
Molecular weight: | 19.934 | ||||||||||||||||||
Isoelectric point: | 10.979 | ||||||||||||||||||
Motif(s): |
![]() |
||||||||||||||||||
|
|||||||||||||||||||
Classification: |
|
||||||||||||||||||
Note(s): | Note(s): ...[more]. | ||||||||||||||||||
External database links: | |||||||||||||||||||
ECOCYC: |
EG12330-MONOMER | ||||||||||||||||||
ECOLIWIKI: |
b0147 | ||||||||||||||||||
INTERPRO: |
IPR014051 | ||||||||||||||||||
INTERPRO: |
IPR009097 | ||||||||||||||||||
INTERPRO: |
IPR004175 | ||||||||||||||||||
MODBASE: |
P37025 | ||||||||||||||||||
PANTHER: |
PTHR35561 | ||||||||||||||||||
PDB: |
4QAK | ||||||||||||||||||
PFAM: |
PF02834 | ||||||||||||||||||
PRIDE: |
P37025 | ||||||||||||||||||
PRODB: |
PRO_000023091 | ||||||||||||||||||
REFSEQ: |
NP_414689 | ||||||||||||||||||
SMR: |
P37025 | ||||||||||||||||||
UNIPROT: |
P37025 | ||||||||||||||||||
Elements in the selected gene context region unrelated to any object in RegulonDB | ![]() ![]() |
---|
Type | Name | Post Left | Post Right | Strand | Notes | Evidence (Confirmed, Strong, Weak) | References | |
---|---|---|---|---|---|---|---|---|
promoter | TSS_278 | 160873 | reverse | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_279 | 160884 | reverse | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_280 | 161071 | reverse | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_281 (cluster) | 161079 | reverse | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_282 | 161142 | reverse | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_283 | 161187 | reverse | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_284 (cluster) | 161195 | reverse | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_285 | 161199 | reverse | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_286 | 161665 | forward | nd | [RS-EPT-CBR] | [1] | ||
promoter | hrpBp2 | 162075 | forward | nd | [ICWHO] | [2] | ||
promoter | TSS_287 | 162077 | forward | nd | [RS-EPT-CBR] | [1] |
Reference(s) |
![]() |
---|---|