RegulonDB

Gene
Name:	tcyN
Synonym(s):	ECK1916, EG12347, b1917, yecC
Genome position(nucleotides):	1997062 <-- 1997814 Genome Browser
Strand:	reverse
Sequence:	Get nucleotide sequence FastaFormat
GC content %:	54.32
External database links:

ASAP:	ABE-0006384
ECHOBASE:	EB2251
ECOLIHUB:	yecC
OU-MICROARRAY:	b1917
STRING:	511145.b1917
COLOMBOS:	tcyN

Product

Name:

cystine ABC transporter ATP binding subunit

Synonym(s):

TcyN, YecC

Sequence:

Get amino acid sequence Fasta Format

Cellular location:

inner membrane

Molecular weight:

27.677

Isoelectric point:

9.619

Motif(s):

Type	Positions	Sequence
	4 -> 244	IEVKNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRSINLLEQPEAGTITVGDITIDTARSLSQQKSLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGAAKALFADPEQPRTRQFL
	36 -> 43	GPSGSGKT
	19 -> 173	LHGIDLEVKPGEVVAIIGPSGSGKTTLLRSINLLEQPEAGTITVGDITIDTARSLSQQKSLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALAMRPEVILFDEPTS
	148 -> 148	G
	165 -> 172	VILFDEPT

Classification:

Multifun Terms (GenProtEC)
Multifun Terms (GenProtEC)		4 - transport --> 4.3 - Primary Active Transporters --> 4.3.A - Pyrophosphate Bond (ATP; GTP; P2) Hydrolysis-driven Active Transporters --> 4.3.A.1 - The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases --> 4.3.A.1.a - ABC superfamily ATP binding cytoplasmic component
Gene Ontology Terms (GO)
	cellular_component	GO:0016020 - membrane GO:0005886 - plasma membrane GO:0043190 - ATP-binding cassette (ABC) transporter complex
	molecular_function	GO:0016887 - ATP hydrolysis activity GO:0000166 - nucleotide binding GO:0005524 - ATP binding GO:0015424 - ABC-type amino acid transporter activity GO:0015426 - ATPase-coupled polar amino acid-transporter activity GO:0015184 - L-cystine transmembrane transporter activity
	biological_process	GO:0006865 - amino acid transport GO:0003333 - amino acid transmembrane transport GO:0015811 - L-cystine transport GO:0015830 - diaminopimelate transport

Note(s):

Note(s): ...[more].

Reference(s):

[1] Ahmer BM., et al., 1998
[2] Michael B., et al., 2001

External database links:

DIP:

ECOCYC:

ECOLIWIKI:

INTERPRO:

INTERPRO:

INTERPRO:

INTERPRO:

INTERPRO:

MODBASE:

PFAM:

PRIDE:

PROSITE:

PROSITE:

REFSEQ:

SMART:

SMR:

SWISSMODEL:

UNIPROT:

Reference(s)
[1] Ahmer BM., van Reeuwijk J., Timmers CD., Valentine PJ., Heffron F., 1998, Salmonella typhimurium encodes an SdiA homolog, a putative quorum sensor of the LuxR family, that regulates genes on the virulence plasmid., J Bacteriol 180(5):1185-93
[2] Michael B., Smith JN., Swift S., Heffron F., Ahmer BM., 2001, SdiA of Salmonella enterica is a LuxR homolog that detects mixed microbial communities., J Bacteriol 183(19):5733-42
[3] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78