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Gene | ![]() ![]() |
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Name: | yebK ![]() |
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Synonym(s): | ECK1854, EG12860, b1853, hexR(P.a.) | |
Genome position(nucleotides): | 1936652 --> 1937521 Genome Browser | |
Strand: | forward | |
Sequence: | Get nucleotide sequence FastaFormat | |
GC content %: |
48.97 | |
External database links: | ||
ASAP: |
ABE-0006179 | |
ECHOBASE: |
EB2702 | |
ECOLIHUB: |
yebK | |
OU-MICROARRAY: |
b1853 | |
STRING: |
511145.b1853 | |
COLOMBOS: | yebK |
Product | ![]() ![]() |
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Name: | DNA-binding transcriptional repressor YebK | ||||||||||||||||||
Synonym(s): | YebK | ||||||||||||||||||
Sequence: | Get amino acid sequence Fasta Format | ||||||||||||||||||
Regulator Family: | RpiR | ||||||||||||||||||
Cellular location: | cytosol | ||||||||||||||||||
Molecular weight: | 31.976 | ||||||||||||||||||
Isoelectric point: | 6.634 | ||||||||||||||||||
Motif(s): | |||||||||||||||||||
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Classification: |
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Note(s): | Note(s): ...[more]. | ||||||||||||||||||
Evidence: | [AIFS] Automated inference of function from sequence [AIFSO] Automated inference of function by sequence orthology [APPHINH] Assay of protein purified to homogeneity from its native host [HIFS] Human inference of function from sequence |
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Reference(s): |
[1] Leyn SA., et al., 2011 [2] Parisutham V., et al., 2015 [3] Perez-Rueda E., et al., 2000 [4] Perez-Rueda E., et al., 2004 |
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External database links: | |||||||||||||||||||
DIP: |
DIP-9891N | ||||||||||||||||||
ECOCYC: |
EG12860-MONOMER | ||||||||||||||||||
ECOLIWIKI: |
b1853 | ||||||||||||||||||
INTERPRO: |
IPR036388 | ||||||||||||||||||
INTERPRO: |
IPR035472 | ||||||||||||||||||
INTERPRO: |
IPR009057 | ||||||||||||||||||
INTERPRO: |
IPR001347 | ||||||||||||||||||
INTERPRO: |
IPR000281 | ||||||||||||||||||
MODBASE: |
P46118 | ||||||||||||||||||
PFAM: |
PF01380 | ||||||||||||||||||
PFAM: |
PF01418 | ||||||||||||||||||
PRIDE: |
P46118 | ||||||||||||||||||
PRODB: |
PRO_000022881 | ||||||||||||||||||
PROSITE: |
PS51464 | ||||||||||||||||||
PROSITE: |
PS51071 | ||||||||||||||||||
REFSEQ: |
NP_416367 | ||||||||||||||||||
SMR: |
P46118 | ||||||||||||||||||
UNIPROT: |
P46118 | ||||||||||||||||||
Elements in the selected gene context region unrelated to any object in RegulonDB | ![]() ![]() |
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Type | Name | Post Left | Post Right | Strand | Notes | Evidence (Confirmed, Strong, Weak) | References | |
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promoter | TSS_2196 | 1935229 | reverse | nd | [RS-EPT-CBR] | [5] | ||
promoter | TSS_2197 | 1935719 | reverse | nd | [RS-EPT-CBR] | [5] | ||
promoter | yebKp2 | 1936590 | forward | nd | [ICWHO], [RS-EPT-CBR] | [5], [6] | ||
promoter | TSS_2199 | 1936593 | forward | nd | [RS-EPT-CBR] | [5] | ||
promoter | TSS_2201 | 1937542 | forward | nd | [RS-EPT-CBR] | [5] | ||
promoter | TSS_2203 | 1937547 | forward | nd | [RS-EPT-CBR] | [5] | ||
promoter | TSS_2204 | 1937561 | reverse | nd | [RS-EPT-CBR] | [5] | ||
promoter | TSS_2205 | 1937670 | forward | nd | [RS-EPT-CBR] | [5] | ||
promoter | TSS_2206 | 1937972 | forward | nd | [RS-EPT-CBR] | [5] | ||
promoter | TSS_2207 | 1938121 | forward | nd | [RS-EPT-CBR] | [5] | ||
promoter | TSS_2208 | 1938452 | forward | nd | [RS-EPT-CBR] | [5] |
Reference(s) |
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