RegulonDB RegulonDB 11.1: Gene Form
   

alaU gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

rrlD ileU alaU

Gene      
Name: alaU    Texpresso search in the literature
Synonym(s): ECK3263, EG30009, b3276, talD
Genome position(nucleotides): 3426958 <-- 3427033
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 63.16
External database links:  
ASAP:
 ABE-0010748
CGSC:
 1037
ECHOBASE:
 EB4172
ECOLIHUB:
 alaU
OU-MICROARRAY:
 b3276
COLOMBOS: alaU


Product      
Name: tRNA-Ala(UGC)
Synonym(s): tRNAalaU
Type: tRNAs
Cellular location: cytosol
Classification:
Multifun Terms (GenProtEC)  
  2 - information transfer --> 2.2 - RNA related --> 2.2.5 - tRNA
Gene Ontology Terms (GO)  
cellular_component GO:0005737 - cytoplasm
GO:0005829 - cytosol
molecular_function GO:0030533 - triplet codon-amino acid adaptor activity
Note(s): Note(s): ...[more].
Evidence: [AS-TAS] Traceable author statement
Reference(s): [1] Siekevitz P., et al., 1981
External database links:  
ECOCYC:
 alaU-tRNA
ECOLIWIKI:
 b3276


Operon      
Name: rrsD-ileU-alaU-rrlD-rrfD-thrV-rrfF         
Operon arrangement:
Transcription unit        Promoter
rrsD-ileU-alaU-rrlD-rrfD-thrV-rrfF
rrsD-ileU-alaU-rrlD-rrfD-thrV-rrfF
rrsD-ileU-alaU-rrlD-rrfD-thrV-rrfF


Transcriptional Regulation      
Display Regulation             
Activated by: Fis
Repressed by: H-NS, Lrp


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References


Reference(s)    

 [1] Siekevitz P., Zamecnik PC., 1981, Ribosomes and protein synthesis., J Cell Biol 91(3 Pt 2):53s-65s

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