RegulonDB RegulonDB 10.8: Gene Form
   

serX gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

Gene      
Name: serX    Texpresso search in the literature
Synonym(s): ECK1018, EG30097, b1032
Genome position(nucleotides): 1097565 <-- 1097652 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
61.36
External database links:  
ASAP:
ABE-0003498
CGSC:
17878
ECHOBASE:
EB4260
OU-MICROARRAY:
b1032
PortEco:
serX
COLOMBOS: serX


Product      
Name: tRNA-Ser(GGA)
Synonym(s): tRNASer5, tRNAserX
Type: tRNAs
Cellular location: cytosol
Classification:
Multifun Terms (GenProtEC)  
  2 - information transfer --> 2.2 - RNA related --> 2.2.5 - tRNA
Gene Ontology Terms (GO)  
cellular_component GO:0005737 - cytoplasm
GO:0005829 - cytosol
molecular_function GO:0030533 - triplet codon-amino acid adaptor activity
Note(s): Note(s): ...[more].
Evidence: [TAS] Traceable author statement
Reference(s): [1] Siekevitz P., et al., 1981
External database links:  
ECOCYC:
serX-tRNA
ECOLIWIKI:
b1032


Operon      
Name: serX         
Operon arrangement:
Transcription unit        Promoter
serX


Transcriptional Regulation      
Display Regulation             
Activated by: Fis


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter TSS_1320 1097652 reverse nd [RS-EPT-CBR] [2]
  promoter TSS_1321 1097759 forward nd [RS-EPT-CBR] [2]
  promoter TSS_1322 1097787 forward nd [RS-EPT-CBR] [2]
  promoter ghrAp6 1097824 forward Similarity to the consensus
Read more >
[ICWHO] [3]
  promoter TSS_1323 (cluster) 1097825 forward For this promoter, there
Read more >
[RS-EPT-CBR] [2]



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