RegulonDB RegulonDB 11.1: Gene Form
   

tyrU gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

tyrU thrU glyT

Gene      
Name: tyrU    Texpresso search in the literature
Synonym(s): ECK3968, EG30107, b3977, sup15B, supM, supZ
Genome position(nucleotides): 4175472 --> 4175556
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 58.82
External database links:  
ASAP:
 ABE-0013013
CGSC:
 52
ECHOBASE:
 EB4270
ECOLIHUB:
 tyrU
OU-MICROARRAY:
 b3977
COLOMBOS: tyrU


Product      
Name: tRNA-Tyr(GUA)
Synonym(s): tRNAtyrU
Type: tRNAs
Cellular location: cytosol
Classification:
Multifun Terms (GenProtEC)  
  2 - information transfer --> 2.2 - RNA related --> 2.2.5 - tRNA
Gene Ontology Terms (GO)  
cellular_component GO:0005737 - cytoplasm
GO:0005829 - cytosol
molecular_function GO:0030533 - triplet codon-amino acid adaptor activity
Note(s): Note(s): ...[more].
Evidence: [AS-TAS] Traceable author statement
Reference(s): [1] Abelson J., et al., 1969
[2] Addepalli B., et al., 2016
[3] Siekevitz P., et al., 1981
External database links:  
ECOCYC:
 tyrU-tRNA
ECOLIWIKI:
 b3977


Operon      
Name: thrU-tyrU-glyT-thrT-tufB         
Operon arrangement:
Transcription unit        Promoter
thrU-tyrU-glyT-thrT-tufB


Transcriptional Regulation      
Display Regulation             
Activated by: Fis


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References


Reference(s)    

 [1] Abelson J., Barnett L., Brenner S., Gefter M., Landy A., Russell R., Smith JD., 1969, Mutant tyrosine transfer ribonucleic acids., FEBS Lett 3(1):1-4

 [2] Addepalli B., Limbach PA., 2016, Pseudouridine in the Anticodon of Escherichia coli tRNATyr(QΨA) Is Catalyzed by the Dual Specificity Enzyme RluF., J Biol Chem 291(42):22327-22337

 [3] Siekevitz P., Zamecnik PC., 1981, Ribosomes and protein synthesis., J Cell Biol 91(3 Pt 2):53s-65s

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