RegulonDB RegulonDB 10.9: Gene Form
   

tff gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

Gene      
Name: tff    Texpresso search in the literature
Synonym(s): ECK0167, G0-8895, b4414, t44
Genome position(nucleotides): 189712 --> 189847 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
50.74
External database links:  
ASAP:
ABE-0047239
ECHOBASE:
EB4502
ECOLIHUB:
tff
COLOMBOS: tff


Product      
Name: putative small RNA T44
Synonym(s): T44, T44 putative small RNA or attenuator, Tff
Type: small RNA
Classification:
Multifun Terms (GenProtEC)  
  9 - DNA sites
Gene Ontology Terms (GO)  
Note(s): Note(s): ...[more].
Evidence: [ICA] Inferred by computational analysis
Reference(s): [1] Rivas E., et al., 2001
External database links:  
ECOCYC:
T44-RNA
ECOLIWIKI:
b4414


Operon      
Name: tff-rpsB-tsf         
Operon arrangement:
Transcription unit        Promoter
rpsB-tsf


RNA cis-regulatory element    
Attenuation: Translational


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter TSS_310 189471 reverse nd [RS-EPT-CBR] [2]
  promoter TSS_311 189532 reverse nd [RS-EPT-CBR] [2]
  promoter TSS_312 189545 reverse nd [RS-EPT-CBR] [2]
  promoter TSS_313 189553 reverse nd [RS-EPT-CBR] [2]
  promoter TSS_314 189621 reverse nd [RS-EPT-CBR] [2]
  promoter TSS_315 189639 forward nd [RS-EPT-CBR] [2]
  promoter TSS_317 190209 forward nd [RS-EPT-CBR] [2]
  promoter TSS_318 190213 forward nd [RS-EPT-CBR] [2]
  promoter TSS_319 (cluster) 190227 forward For this promoter, there
Read more >
[RS-EPT-CBR] [2]
  promoter TSS_320 190234 forward nd [RS-EPT-CBR] [2]
  promoter TSS_321 190257 forward nd [RS-EPT-CBR] [2]
  promoter TSS_322 190355 forward nd [RS-EPT-CBR] [2]
  promoter TSS_323 190448 forward nd [RS-EPT-CBR] [2]



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