RegulonDB RegulonDB 10.8: Gene Form
   

IS128 gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

sseA ryfA IS128 C0614 sseB ryfAp11 ryfAp11

Gene      
Name: IS128    Texpresso search in the literature
Synonym(s): G0-8908
Type: Phantom Gene
Genome position(nucleotides): 2653515 --> 2653723 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 35.41
Note(s): IS128 is a candidate small RNA locus of approximately 90-95 nt in length Chen S,2002.
Review: 12654996
External database links:  
PortEco:
 IS128
COLOMBOS: IS128


Operon      
Name: IS128         
Operon arrangement:
Transcription unit        Promoter
 


Regulation by small RNA    
  Display Regulation
small RNA C0614, IS129


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter ryfAp11 2653699 forward Similarity to the consensus
Read more > 		[ICWHO] [1]


Evidence    

 [ICWHO] Inferred computationally without human oversight


Reference(s)    

 [1] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78

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