RegulonDB RegulonDB 10.10: Gene Form
   

yagM gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

yagM yagL ykgV yagN anti-terminator terminator yagLp7 yagLp7

Gene      
Name: yagM    Texpresso search in the literature
Synonym(s): ECK0278, G6150, b0279
Genome position(nucleotides): 293945 <-- 294799 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 36.26
External database links:  
ASAP:
 ABE-0000972
ECHOBASE:
 EB3322
ECOLIHUB:
 yagM
OU-MICROARRAY:
 b0279
STRING:
 511145.b0279
COLOMBOS: yagM


Product      
Name: CP4-6 prophage; protein YagM
Synonym(s): YagM
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 32.678
Isoelectric point: 8.565
Classification:
Multifun Terms (GenProtEC)  
  8 - extrachromosomal --> 8.1 - prophage genes and phage related functions
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
 G6150-MONOMER
ECOLIWIKI:
 b0279
INTERPRO:
 IPR016513
PRIDE:
 P71296
REFSEQ:
 NP_414813
UNIPROT:
 P71296


Operon      
Name: yagML         
Operon arrangement:
Transcription unit        Promoter
yagML


RNA cis-regulatory element    
Attenuation: Transcriptional


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter yagLp7 294031 reverse nd [ICWHO] [1]


Evidence    

 [ICWHO] Inferred computationally without human oversight


Reference(s)    

 [1] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78

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