RegulonDB RegulonDB 10.10: Gene Form
   

yaiT gene in Escherichia coli K-12 genome

Gene      
Name: yaiT    Texpresso search in the literature
Synonym(s): ECK0368, ECK0369, G6222, b0371, b0374, b4580, yaiU
Type: Pseudo Gene
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 47.79
External database links:  
ASAP:
 ABE-0001274
ASAP:
 ABE-0001288
ASAP:
 ABE-0285112
ECHOBASE:
 EB3373
ECHOBASE:
 EB4319
ECOLIHUB:
 yaiU
ECOLIHUB:
 yaiT
ECOLIWIKI:
 b0374
OU-MICROARRAY:
 b0374
OU-MICROARRAY:
 b0371
STRING:
 316407.85674512
UNIPROT:
 P77199
COLOMBOS: yaiT


Product      
Name: putative autotransporter YaiT
Sequence: Get amino acid sequence Fasta Format
Isoelectric point: 8.873
Motif(s):
 
Type Positions Sequence
1 -> 27 MHSWKKKLVVSQLALACTLAITSQANA
28 -> 968 ANYDTWTYIDNPVTALDWDHMDKAGTVDGNYVNYSGFVYYNNTNGDFDQSFNGDTVNGTISTYYLNHDYADSTANQLDISNSVIHGSITSMLPGGYYDRFDADGNNLGGYDFYTDAVVDTHWRDGDVFTLNIANTTIDDDYEALYFTDSYKDGDVTKHTNETFDTSEGVAVNLDVESNINISNNSRVAGIALSQGNTYNETYTTESHTWDNNISVKDSTVTSGSNYILDSNTYGKTGHFGNSDEPSDYAGPGDVAMSFTASGSDYAMKNNVFLSNSTLMGDVAFTSTWNSNFDPNGHDSNGDGVKDTNGGWTDDSLNVDELNLTLDNGSKWVGQAIYNVAETSAMYDVATNSLTPDATYENNDWKRVVDDKVFQSGVFNVALNNGSEWDTTGRSIVDTLTVNNGSQVNVSESKLTSDTIDLTNGSSLNIGEDGYVDTDHLTINSYSTVALTESTGWGAD*SYPRNMDTGLSEVLVFKLFRTEAATPTVPPPPIVITFDIIKHRCPHYFPADKVFSMDTFHFQRMKEAFHAGIIVAATFCAHTSTQIMPLQLRLIIC*TVLASTVRVNDNVPGPLTPPQRHLQGIAGQLRRHAWRH*PANNGT*PQVNDHCQIQPAFICT*VRDVSCPLLVRATGVKILLQQIF*HRQAVCAVADRAELPGGLCPQSLTAQACRHGFYVKGVTLSTQFIRQAWGTVTLF*PGKSREDNAVAVLAELLTRAYPCPPLTPRIPAAAGHPEHAAHCFDAELSLMFFNKDILHFRRFAKYVAAFWRIASSSSRSASWRLRRAISVDISSSRSEDVC*FCCLLRQL*SCDSYRLSSRAAAVTPMRSASFRASLRNSGECCLRGFLLVDTVFVM*VTSD*EFTHLAACPLLLGKIRLQPVRQYYHRN*RRCIGCER*SVRY*SFPY*QTGTDQRQHR*P*R*RSIWCVRYP*QRLRSE
703 -> 968 FYVKGVTLSTQFIRQAWGTVTLF*PGKSREDNAVAVLAELLTRAYPCPPLTPRIPAAAGHPEHAAHCFDAELSLMFFNKDILHFRRFAKYVAAFWRIASSSSRSASWRLRRAISVDISSSRSEDVC*FCCLLRQL*SCDSYRLSSRAAAVTPMRSASFRASLRNSGECCLRGFLLVDTVFVM*VTSD*EFTHLAACPLLLGKIRLQPVRQYYHRN*RRCIGCER*SVRY*SFPY*QTGTDQRQHR*P*R*RSIWCVRYP*QRLRSE

 
Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
cellular_component GO:0019867 - outer membrane
GO:0016020 - membrane
Note(s): Note(s): ...[more].
External database links:  
DIP:
 DIP-11280N
ECOCYC:
 G6222-MONOMER
ECOLIWIKI:
 b0371
ECOO157CYC:
 Z0469-MONOMER
INTERPRO:
 IPR006315
INTERPRO:
 IPR011050
INTERPRO:
 IPR005546
INTERPRO:
 IPR004899
INTERPRO:
 IPR012332
INTERPRO:
 IPR036709
INTERPRO:
 IPR003991
MODBASE:
 P77199
PFAM:
 PF03212
PFAM:
 PF03797
PRIDE:
 P77199
PRINTS:
 PR01484
PROSITE:
 PS51208
SMART:
 SM00869
SMR:
 P77199
UNIPROT:
 P77199


Operon      
Name: yaiT         
Operon arrangement:
Transcription unit        Promoter
yaiT


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



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