RegulonDB RegulonDB 10.10: Gene Form
   

ybaP gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

Gene      
Name: ybaP    Texpresso search in the literature
Synonym(s): ECK0476, G6258, b0482
Genome position(nucleotides): 507286 <-- 508080 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
54.09
External database links:  
ASAP:
ABE-0001673
ECHOBASE:
EB3033
ECOLIHUB:
ybaP
OU-MICROARRAY:
b0482
STRING:
511145.b0482
COLOMBOS: ybaP


Product      
Name: TraB family protein YbaP
Synonym(s): YbaP
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 29.902
Isoelectric point: 6.751
Motif(s):
 
Type Positions Sequence
30 -> 264 GNRHFHLIGSIHMGSHDMAPLPTRLLKKLKNADALIVEADVSTSDTPFANLPACEALEERISEEQLQNLQHISQEMGISPSLFSTQPLWQIAMVLQATQAQKLGLRAEYGIDYQLLQAAKQQHKPVIELEGAENQIAMLLQLPDKGLALLDDTLTHWHTNARLLQQMMSWWLNAPPQNNDITLPNTFSQSLYDVLMHQRNLAWRDKLRAMPPGRYVVAVGALHLYGEGNLPQMLR

 

Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
G6258-MONOMER
ECOLIWIKI:
b0482
INTERPRO:
IPR002816
PFAM:
PF01963
PRIDE:
P77301
REFSEQ:
NP_415015
SMR:
P77301
UNIPROT:
P77301


Operon      
Name: ybaP         
Operon arrangement:
Transcription unit        Promoter
ybaP


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter TSS_646 507216 reverse nd [RS-EPT-CBR] [1]
  promoter TSS_647 507236 reverse nd [RS-EPT-CBR] [1]
  promoter TSS_648 507241 reverse nd [RS-EPT-CBR] [1]
  promoter TSS_649 508097 reverse nd [RS-EPT-CBR] [1]
  promoter ybaQp3 508174 forward nd [ICWHO] [2]
  promoter ybaPp3 508262 reverse nd [ICWHO] [2]
  promoter ybaPp4 508264 reverse nd [ICWHO] [2]
  promoter ybaPp6 508284 reverse nd [ICWHO] [2]



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