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Gene | ![]() ![]() |
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Name: | ybcM ![]() |
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Synonym(s): | ECK0537, G6302, b0546 | |
Genome position(nucleotides): | 571454 --> 572251 Genome Browser | |
Strand: | forward | |
Sequence: | Get nucleotide sequence FastaFormat | |
GC content %: |
36.22 | |
External database links: | ||
ASAP: |
ABE-0001871 | |
ECHOBASE: |
EB3394 | |
ECOLIHUB: |
ybcM | |
ECOO157CYC: |
Z0321 | |
ECOO157CYC: |
Z2104 | |
OU-MICROARRAY: |
b0546 | |
STRING: |
511145.b0546 | |
COLOMBOS: | ybcM |
Product | ![]() ![]() |
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Name: | DLP12 prophage; putative DNA-binding transcriptional regulator | |||||||||||||||
Synonym(s): | YbcM | |||||||||||||||
Sequence: | Get amino acid sequence Fasta Format | |||||||||||||||
Cellular location: | cytosol | |||||||||||||||
Molecular weight: | 30.841 | |||||||||||||||
Isoelectric point: | 9.78 | |||||||||||||||
Motif(s): | ||||||||||||||||
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Classification: |
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Note(s): | Note(s): ...[more]. | |||||||||||||||
Evidence: | [AIFS] Automated inference of function from sequence | |||||||||||||||
Reference(s): | [1] Perez-Rueda E., et al., 2004 | |||||||||||||||
External database links: | ||||||||||||||||
ECOCYC: |
G6302-MONOMER | |||||||||||||||
ECOLIWIKI: |
b0546 | |||||||||||||||
ECOO157CYC: |
Z2104-MONOMER | |||||||||||||||
ECOO157CYC: |
Z0321-MONOMER | |||||||||||||||
INTERPRO: |
IPR009057 | |||||||||||||||
INTERPRO: |
IPR018060 | |||||||||||||||
MODBASE: |
P77634 | |||||||||||||||
PFAM: |
PF12833 | |||||||||||||||
PRIDE: |
P77634 | |||||||||||||||
PROSITE: |
PS01124 | |||||||||||||||
REFSEQ: |
NP_415078 | |||||||||||||||
SMART: |
SM00342 | |||||||||||||||
SMR: |
P77634 | |||||||||||||||
UNIPROT: |
P77634 | |||||||||||||||
Elements in the selected gene context region unrelated to any object in RegulonDB | ![]() ![]() |
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Type | Name | Post Left | Post Right | Strand | Notes | Evidence (Confirmed, Strong, Weak) | References | |
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promoter | TSS_683 | 571937 | forward | nd | [RS-EPT-CBR] | [2] | ||
promoter | ybcNp6 | 572314 | forward | nd | [ICWHO] | [3] | ||
promoter | ybcNp5 | 572319 | forward | nd | [ICWHO] | [3] |
Reference(s) |
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