RegulonDB RegulonDB 10.9: Gene Form
   

citG gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

citF citT citG citX citTp4 citTp4 citTp6 citTp6

Gene      
Name: citG    Texpresso search in the literature
Synonym(s): ECK0606, G6339, b0613, ybdT
Genome position(nucleotides): 646631 <-- 647509 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
54.72
External database links:  
ASAP:
ABE-0002114
ECHOBASE:
EB3309
ECOLIHUB:
citG
OU-MICROARRAY:
b0613
STRING:
511145.b0613
COLOMBOS: citG


Product      
Name: triphosphoribosyl-dephospho-CoA synthase
Synonym(s): CitG, YbdT
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 31.644
Isoelectric point: 6.237
Motif(s):
 
Type Positions Sequence
25 -> 290 GWRAMLTEVNLSPKPGLVDRINCGAHKDMALEDFHRSALAIQGWLPRFIEFGACSAEMAPEAVLHGLRPIGMACEGDMFRATAGVNTHKGSIFSLGLLCAAIGRLLQLNQPVTPTTVCSTAASFCRGLTDRELRTNNSQLTAGQRLYQQLGLTGARGEAEAGYPLVINHALPHYLTLLDQGLDPELALLDTLLLLMAINGDTNVASRGGEGGLRWLQREAQTLLQKGGIRTPADLDYLRQFDRECIERNLSPGGSADLLILTWFLA

 

Classification:
Multifun Terms (GenProtEC)  
  2 - information transfer --> 2.3 - protein related
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
molecular_function GO:0016740 - transferase activity
GO:0000166 - nucleotide binding
GO:0005524 - ATP binding
GO:0046917 - triphosphoribosyl-dephospho-CoA synthase activity
biological_process GO:0016310 - phosphorylation
GO:0051191 - prosthetic group biosynthetic process
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
G6339-MONOMER
ECOLIWIKI:
b0613
INTERPRO:
IPR017551
INTERPRO:
IPR002736
PANTHER:
PTHR30201
PFAM:
PF01874
PRIDE:
P77231
PRODB:
PRO_000022291
REFSEQ:
NP_415146
UNIPROT:
P77231


Operon      
Name: citCDEFXG         
Operon arrangement:
Transcription unit        Promoter
citCDEFXG
citCDEFXG


Transcriptional Regulation      
Display Regulation             
Activated by: DpiA
Repressed by: CRP, FNR, NarL, ArcA


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter citTp6 646603 reverse Similarity to the consensus
Read more >
[ICWHO] [1]
  promoter citTp4 646632 reverse Similarity to the consensus
Read more >
[ICWHO] [1]


Evidence    

 [ICWHO] Inferred computationally without human oversight



Reference(s)    

 [1] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78


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