RegulonDB RegulonDB 10.9: Gene Form
   

lysZ gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

lysY lysZ lysQ Cis-reg Cis-reg

Gene      
Name: lysZ    Texpresso search in the literature
Synonym(s): ECK0737, G6391, b0748
Genome position(nucleotides): 781369 --> 781444 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
50.0
External database links:  
ASAP:
ABE-0002535
ECHOBASE:
EB4287
ECOLIHUB:
lysZ
OU-MICROARRAY:
b0748
COLOMBOS: lysZ


Product      
Name: tRNA-Lys(UUU)
Synonym(s): tRNAlysZ
Type: tRNAs
Cellular location: cytosol
Classification:
Multifun Terms (GenProtEC)  
  2 - information transfer --> 2.2 - RNA related --> 2.2.5 - tRNA
Gene Ontology Terms (GO)  
cellular_component GO:0005737 - cytoplasm
GO:0005829 - cytosol
molecular_function GO:0030533 - triplet codon-amino acid adaptor activity
Note(s): Note(s): ...[more].
Evidence: [TAS] Traceable author statement
Reference(s): [1] Murphy FV., et al., 2004
[2] Siekevitz P., et al., 1981
External database links:  
ECOCYC:
RNA0-302
ECOLIWIKI:
b0748


Operon      
Name: lysZ         
Operon arrangement:
Transcription unit        Promoter
lysZ


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References


Reference(s)    

 [1] Murphy FV., Ramakrishnan V., Malkiewicz A., Agris PF., 2004, The role of modifications in codon discrimination by tRNA(Lys)UUU., Nat Struct Mol Biol 11(12):1186-91

 [2] Siekevitz P., Zamecnik PC., 1981, Ribosomes and protein synthesis., J Cell Biol 91(3 Pt 2):53s-65s


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