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Gene | ![]() ![]() |
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Name: | cspH ![]() |
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Synonym(s): | ECK0979, G6510, b0989, cspK | |
Genome position(nucleotides): | 1050963 <-- 1051175 | |
Strand: | reverse | |
Sequence: | Get nucleotide sequence FastaFormat | |
GC content %: |
46.95 | |
External database links: | ||
ASAP: |
ABE-0003341 | |
ECHOBASE: |
EB4029 | |
ECOLIHUB: |
cspH | |
OU-MICROARRAY: |
b0989 | |
STRING: |
511145.b0989 | |
COLOMBOS: | cspH |
Product | ![]() ![]() |
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Name: | CspA family protein CspH | ||||||||||||
Synonym(s): | CspH, CspK | ||||||||||||
Sequence: | Get amino acid sequence Fasta Format | ||||||||||||
Cellular location: | cytosol | ||||||||||||
Molecular weight: | 7.72 | ||||||||||||
Isoelectric point: | 10.95 | ||||||||||||
Motif(s): | |||||||||||||
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Classification: |
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Note(s): | Note(s): ...[more]. | ||||||||||||
Reference(s): |
[1] Higuchi K., et al., 2020 [2] Kram KE., et al., 2020 [3] Nahku R., et al., 2011 |
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External database links: | |||||||||||||
ALPHAFOLD: |
P0A982 | ||||||||||||
ECOCYC: |
G6510-MONOMER | ||||||||||||
ECOLIWIKI: |
b0989 | ||||||||||||
INTERPRO: |
IPR012340 | ||||||||||||
INTERPRO: |
IPR019844 | ||||||||||||
INTERPRO: |
IPR012156 | ||||||||||||
INTERPRO: |
IPR011129 | ||||||||||||
INTERPRO: |
IPR002059 | ||||||||||||
MODBASE: |
P0A982 | ||||||||||||
PFAM: |
PF00313 | ||||||||||||
PRIDE: |
P0A982 | ||||||||||||
PROSITE: |
PS00352 | ||||||||||||
PROSITE: |
PS51857 | ||||||||||||
REFSEQ: |
NP_415509 | ||||||||||||
SMART: |
SM00357 | ||||||||||||
SMR: |
P0A982 | ||||||||||||
SWISSMODEL: |
P0A982 | ||||||||||||
UNIPROT: |
P0A982 | ||||||||||||
RNA cis-regulatory element | ![]() |
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Attenuation: | Transcriptional |
Elements in the selected gene context region unrelated to any object in RegulonDB | ![]() ![]() |
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Type | Name | Post Left | Post Right | Strand | Notes | Evidence (Confirmed, Strong, Weak) | References | |
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promoter | TSS_1309 (cluster) | 1050701 | reverse | nd | [RS-EPT-CBR] | [4] | ||
promoter | cspHp8 | 1051205 | reverse | nd | [COMP-AINF] | [5] | ||
promoter | cspHp10 | 1051278 | reverse | nd | [COMP-AINF] | [5] | ||
promoter | cspHp12 | 1051284 | reverse | nd | [COMP-AINF] | [5] | ||
promoter | cspHp14 | 1051304 | reverse | nd | [COMP-AINF] | [5] | ||
promoter | cspGp | 1051305 | forward | nd | [COMP-AINF-POSITIONAL-IDENTIFICATION], [RS-EPT-CBR] | [4], [6] | ||
promoter | cspHp15 | 1051307 | reverse | nd | [COMP-AINF] | [5] | ||
promoter | cspHp9 | 1051330 | reverse | nd | [COMP-AINF] | [5] | ||
promoter | cspHp13 | 1051373 | reverse | nd | [COMP-AINF] | [5] |
Reference(s) |
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