RegulonDB RegulonDB 10.8: Gene Form
   

ymfL gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

ymfL ymfM oweE ymfN ymfT nc10 aaaE terminator cohEp10 cohEp10

Gene      
Name: ymfL    Texpresso search in the literature
Synonym(s): ECK1133, G6591, b1147
Genome position(nucleotides): 1203268 --> 1203825 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
49.64
External database links:  
ASAP:
ABE-0003860
ECHOBASE:
EB3998
OU-MICROARRAY:
b1147
PortEco:
ymfL
STRING:
511145.b1147
COLOMBOS: ymfL


Product      
Name: e14 prophage; uncharacterized protein YmfL
Synonym(s): YmfL, e14 prophage; putative DNA-binding transcriptional regulator
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 20.212
Isoelectric point: 4.571
Classification:
Multifun Terms (GenProtEC)  
  8 - extrachromosomal --> 8.1 - prophage genes and phage related functions
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
G6591-MONOMER
ECOLIWIKI:
b1147
PRIDE:
P75976
REFSEQ:
NP_415665
SMR:
P75976
UNIPROT:
P75976


Operon      
Name: ymfTLMNR-beeE-jayE-ymfQ-ycfK-tfaP         
Operon arrangement:
Transcription unit        Promoter
 


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter cohEp10 1203088 reverse Similarity to the consensus
Read more >
[ICWHO] [1]


Evidence    

 [ICWHO] Inferred computationally without human oversight



Reference(s)    

 [1] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78


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