RegulonDB RegulonDB 10.9: Gene Form
   

ymfM gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

ymfN aaaE ymfL ymfM oweE ymfT nc10 terminator cohEp10 cohEp10

Gene      
Name: ymfM    Texpresso search in the literature
Synonym(s): ECK1134, G6592, b1148
Genome position(nucleotides): 1203822 --> 1204160 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
49.85
External database links:  
ASAP:
ABE-0003862
ECHOBASE:
EB3999
ECOLIHUB:
ymfM
OU-MICROARRAY:
b1148
STRING:
511145.b1148
COLOMBOS: ymfM


Product      
Name: e14 prophage; uncharacterized protein YmfM
Synonym(s): YmfM
Sequence: Get amino acid sequence Fasta Format
Molecular weight: 12.156
Isoelectric point: 9.633
Classification:
Multifun Terms (GenProtEC)  
  8 - extrachromosomal --> 8.1 - prophage genes and phage related functions
Gene Ontology Terms (GO)  
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
G6592-MONOMER
ECOLIWIKI:
b1148
PRIDE:
P75977
REFSEQ:
NP_415666
SMR:
P75977
UNIPROT:
P75977


Operon      
Name: ymfTLMNR-beeE-jayE-ymfQ-ycfK-tfaP         
Operon arrangement:
Transcription unit        Promoter
ymfTLMNR-beeE-jayE-ymfQ-ycfK-tfaP


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter cohEp10 1203088 reverse Similarity to the consensus
Read more >
[ICWHO] [1]


Evidence    

 [ICWHO] Inferred computationally without human oversight



Reference(s)    

 [1] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78


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