RegulonDB RegulonDB 10.10: Gene Form
   

ymfR gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

ymfN aaaE jayE beeE oweE ymfR ymfQ

Gene      
Name: ymfR    Texpresso search in the literature
Synonym(s): ECK1136, G6594, b1150
Genome position(nucleotides): 1205549 --> 1205731 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 60.11
External database links:  
ASAP:
 ABE-0003868
ECHOBASE:
 EB4082
ECOLIHUB:
 ymfR
OU-MICROARRAY:
 b1150
STRING:
 511145.b1150
COLOMBOS: ymfR


Product      
Name: e14 prophage; IPR020297 domain-containing protein YmfR
Synonym(s): YmfR
Sequence: Get amino acid sequence Fasta Format
Cellular location: inner membrane
Molecular weight: 6.381
Isoelectric point: 9.209
Motif(s):
 
Type Positions Sequence
5 -> 25 ILAPLVGVLGALLLAYGAWLI
26 -> 46 YPPAGFVVAGALCLFWSWLVA

 
Classification:
Multifun Terms (GenProtEC)  
  8 - extrachromosomal --> 8.1 - prophage genes and phage related functions
Gene Ontology Terms (GO)  
cellular_component GO:0016020 - membrane
GO:0005886 - plasma membrane
GO:0016021 - integral component of membrane
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
 G6594-MONOMER
ECOLIWIKI:
 b1150
PRIDE:
 P75979
REFSEQ:
 NP_415668
UNIPROT:
 P75979


Operon      
Name: ymfTLMNR-beeE-jayE-ymfQ-ycfK-tfaP         
Operon arrangement:
Transcription unit        Promoter
ymfTLMNR-beeE-jayE-ymfQ-ycfK-tfaP


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



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