RegulonDB

Gene
Name:	pliG
Synonym(s):	ECK1166, G6615, b1178, ycgK
Genome position(nucleotides):	1227071 <-- 1227472 Genome Browser
Strand:	reverse
Sequence:	Get nucleotide sequence FastaFormat
GC content %:	43.03
External database links:

ASAP:	ABE-0003948
ECHOBASE:	EB3651
ECOLIHUB:	ycgK
OU-MICROARRAY:	b1178
STRING:	511145.b1178
COLOMBOS:	pliG

Product

Name:

inhibitor of g-type lysozyme

Synonym(s):

PliG, YcgK

Sequence:

Get amino acid sequence Fasta Format

Cellular location:

cytosol,periplasmic space

Molecular weight:

14.906

Isoelectric point:

9.955

Motif(s):

Type	Positions	Sequence
	1 -> 22	MKIKSIRKAVLLLALLTSTSFA
	23 -> 133	AGKNVNVEFRKGHSSAQYSGEIKGYDYDTYTFYAKKGQKVHVSISNEGADTYLFGPGIDDSVDLSRYSPELDSHGQYSLPASGKYELRVLQTRNDARKNKTKKYNVDIQIK
	48 -> 111	DYDTYTFYAKKGQKVHVSISNEGADTYLFGPGIDDSVDLSRYSPELDSHGQYSLPASGKYELRV

Classification:

Multifun Terms (GenProtEC)
Multifun Terms (GenProtEC)		5 - cell processes --> 5.6 - protection
Gene Ontology Terms (GO)
	cellular_component	GO:0005829 - cytosol GO:0030288 - outer membrane-bounded periplasmic space GO:0042597 - periplasmic space
	molecular_function	GO:0060241 - lysozyme inhibitor activity
	biological_process	GO:0043086 - negative regulation of catalytic activity

Note(s):

Note(s): ...[more].

Evidence:

[APPHINH] Assay of protein purified to homogeneity from its native host

Reference(s):

[1] Vanderkelen L., et al., 2011

External database links:

ECOCYC:

ECOLIWIKI:

INTERPRO:

PDB:

PDB:

PDB:

PFAM:

PRIDE:

REFSEQ:

SMR:

UNIPROT:

Operon

Name:

pliG

Operon arrangement:

Transcription unit	Promoter
pliG

Elements in the selected gene context region unrelated to any object in RegulonDB

	Type	Name	Post Left	Post Right	Strand	Notes	Evidence (Confirmed, Strong, Weak)	References
	promoter	TSS_1509	1227506		reverse	nd	[RS-EPT-CBR]	[2]

Evidence
[RS-EPT-CBR] RNA-seq using two enrichment strategies for primary transcripts and consistent biological replicates

Reference(s)
[1] Vanderkelen L., Van Herreweghe JM., Vanoirbeek KG., Baggerman G., Myrnes B., Declerck PJ., Nilsen IW., Michiels CW., Callewaert L., 2011, Identification of a bacterial inhibitor against g-type lysozyme., Cell Mol Life Sci 68(6):1053-64
[2] Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muñiz-Rascado L, García-Sotelo JS, Weiss V, Solano-Lira H, Martínez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernández S, Alquicira-Hernández K, López-Fuentes A, Porrón-Sotelo L, Huerta AM, Bonavides-Martínez C, Balderas-Martínez YI, Pannier L, Olvera M, Labastida A, Jiménez-Jacinto V, Vega-Alvarado L, Del Moral-Chávez V, Hernández-Alvarez A, Morett E, Collado-Vides J., 2012, RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more., Nucleic Acids Res.

Reference(s)

[1] Vanderkelen L., Van Herreweghe JM., Vanoirbeek KG., Baggerman G., Myrnes B., Declerck PJ., Nilsen IW., Michiels CW., Callewaert L., 2011, Identification of a bacterial inhibitor against g-type lysozyme., Cell Mol Life Sci 68(6):1053-64

[2] Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muñiz-Rascado L, García-Sotelo JS, Weiss V, Solano-Lira H, Martínez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernández S, Alquicira-Hernández K, López-Fuentes A, Porrón-Sotelo L, Huerta AM, Bonavides-Martínez C, Balderas-Martínez YI, Pannier L, Olvera M, Labastida A, Jiménez-Jacinto V, Vega-Alvarado L, Del Moral-Chávez V, Hernández-Alvarez A, Morett E, Collado-Vides J., 2012, RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more., Nucleic Acids Res.