RegulonDB RegulonDB 10.10: Gene Form
   

tam gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

yneE tam lsrG terminator anti-terminator anti-anti-terminator tamp tamp

Gene      
Name: tam    Texpresso search in the literature
Synonym(s): ECK1512, G6806, b1519, lsrE, yneD
Genome position(nucleotides): 1607346 --> 1608104 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 53.89
External database links:  
ASAP:
 ABE-0005070
ECHOBASE:
 EB3573
ECOLIHUB:
 tam
OU-MICROARRAY:
 b1519
STRING:
 511145.b1519
COLOMBOS: tam


Product      
Name: trans-aconitate 2-methyltransferase
Synonym(s): LsrE, Tam, YneD
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 29.006
Isoelectric point: 4.584
Motif(s):
 
Type Positions Sequence
2 -> 252 SDWNPSLYLHFSAERSRPAVELLARVPLENVEYVADLGCGPGNSTALLQQRWPAARITGIDSSPAMIAEARSALPDCQFVEADIRNWQPVQALDLIFANASLQWLPDHYELFPHLVSLLNPQGVLAVQMPDNWLEPTHVLMREVAWEQNYPDRGREPLAGVHAYYDILSEAGCEVDIWRTTYYHQMPSHQAIIDWVTATGLRPWLQDLTESEQQLFLKRYHQMLEEQYPLQENGQILLAFPRLFIVARRME
35 -> 124 VADLGCGPGNSTALLQQRWPAARITGIDSSPAMIAEARSALPDCQFVEADIRNWQPVQALDLIFANASLQWLPDHYELFPHLVSLLNPQG

 
Classification:
Multifun Terms (GenProtEC)  
  1 - metabolism --> 1.7 - central intermediary metabolism --> 1.7.1 - unassigned reversible reactions
  5 - cell processes --> 5.6 - protection --> 5.6.2 - detoxification
Gene Ontology Terms (GO)  
cellular_component GO:0005737 - cytoplasm
GO:0005829 - cytosol
molecular_function GO:0008168 - methyltransferase activity
GO:0016740 - transferase activity
GO:0030798 - trans-aconitate 2-methyltransferase activity
biological_process GO:0032259 - methylation
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
 G6806-MONOMER
ECOLIWIKI:
 b1519
INTERPRO:
 IPR029063
INTERPRO:
 IPR041698
INTERPRO:
 IPR023506
INTERPRO:
 IPR023149
MODBASE:
 P76145
PFAM:
 PF13649
PRIDE:
 P76145
PRODB:
 PRO_000024024
REFSEQ:
 NP_416036
SMR:
 P76145
UNIPROT:
 P76145


Operon      
Name: lsrACDBFG-tam         
Operon arrangement:
Transcription unit        Promoter
lsrACDBFG-tam
tam


Transcriptional Regulation      
Display Regulation             
Activated by: CRP
Repressed by: LsrR


RNA cis-regulatory element    
Attenuation: Transcriptional


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



RegulonDB