RegulonDB RegulonDB 11.1: Gene Form
   

rspB gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

rspA rspB ynfP

Gene      
Name: rspB    Texpresso search in the literature
Synonym(s): ECK1575, G6838, b1580
Genome position(nucleotides): 1652896 <-- 1653915
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 44.9
External database links:  
ASAP:
 ABE-0005272
ECHOBASE:
 EB2346
ECOLIHUB:
 rspB
OU-MICROARRAY:
 b1580
STRING:
 511145.b1580
COLOMBOS: rspB


Product      
Name: putative zinc-binding dehydrogenase RspB
Synonym(s): RspB, putative oxidoreductase, Zn-dependent and NAD(P)-binding
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 36.564
Isoelectric point: 6.351
Motif(s):
 
Type Positions Sequence Comment
25 -> 131 GEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLGVHADGGFSEYAVVPAKNAWKI
171 -> 297 PIGLTIVQVLKGVYNVKNVIVADRIDERLEKAKESGADWAINNSQTPLGEIFTEKGIKPTLIIDAACHPSILKEAVTLASPAARIVLMGFSSEPSEVIQQGITGKELSIFSSRLNANKFPIVIDWLS

 
Classification:
Multifun Terms (GenProtEC)  
  5 - cell processes --> 5.5 - adaptations --> 5.5.3 - starvation
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
molecular_function GO:0046872 - metal ion binding
GO:0016491 - oxidoreductase activity
GO:0008270 - zinc ion binding
GO:0008868 - galactitol-1-phosphate 5-dehydrogenase activity
Note(s): Note(s): ...[more].
External database links:  
ALPHAFOLD:
 P38105
ECOCYC:
 G6838-MONOMER
ECOLIWIKI:
 b1580
INTERPRO:
 IPR002328
INTERPRO:
 IPR013154
INTERPRO:
 IPR036291
INTERPRO:
 IPR013149
INTERPRO:
 IPR011032
MODBASE:
 P38105
PFAM:
 PF00107
PFAM:
 PF08240
PRIDE:
 P38105
PROSITE:
 PS00059
REFSEQ:
 NP_416097
SMR:
 P38105
UNIPROT:
 P38105


Operon      
Name: rspAB         
Operon arrangement:
Transcription unit        Promoter
rspA-rspB


Transcriptional Regulation      
Display Regulation             
Activated by: CRP
Repressed by: RspR


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



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