RegulonDB RegulonDB 11.1: Gene Form
   

asr gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

ynfM asr unknown ydgU PhoB RcdA RstA RcdA terminator asrp2 asrp2 asrp asrp

Gene      
Name: asr    Texpresso search in the literature
Synonym(s): ECK1592, G6855, b1597
Genome position(nucleotides): 1671376 --> 1671684
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
51.13
External database links:  
ASAP:
ABE-0005337
ECHOBASE:
EB2069
ECOLIHUB:
asr
OU-MICROARRAY:
b1597
STRING:
511145.b1597
COLOMBOS: asr


Product      
Name: acid shock protein
Synonym(s): Asr
Sequence: Get amino acid sequence Fasta Format
Cellular location: periplasmic space
Molecular weight: 10.591
Isoelectric point: 11.374
Motif(s):
 
Type Positions Sequence Comment
1 -> 21 MKKVLALVVAAAMGLSSAAFA
21 -> 39 AAETTTTPAPTATTTKAAP UniProt: Polar residues; Sequence Annotation Type: compositionally biased region.
22 -> 58 AETTTTPAPTATTTKAAPAKTTHHKKQHKAAPAQKAQ
40 -> 67 AKTTHHKKQHKAAPAQKAQAAKKHHKNT UniProt: Basic residues; Sequence Annotation Type: compositionally biased region.
59 -> 102 AAKKHHKNTKAEQKAPEQKAQAAKKHAKKHSHQQPAKPAAQPAA

 

Classification:
Multifun Terms (GenProtEC)  
  5 - cell processes --> 5.5 - adaptations --> 5.5.4 - pH
Gene Ontology Terms (GO)  
cellular_component GO:0030288 - outer membrane-bounded periplasmic space
GO:0042597 - periplasmic space
biological_process GO:0006950 - response to stress
GO:0010447 - response to acidic pH
GO:0010043 - response to zinc ion
Note(s): Note(s): ...[more].
Evidence: [EXP-IMP] Inferred from mutant phenotype
Reference(s): [1] Ramos-Morales F. 2012
[2] Seputiene V., et al., 2003
External database links:  
ALPHAFOLD:
P36560
DIP:
DIP-9183N
ECOCYC:
G6855-MONOMER
ECOLIWIKI:
b1597
INTERPRO:
IPR023497
PRIDE:
P36560
PRODB:
PRO_000022174
REFSEQ:
NP_416114
UNIPROT:
P36560


Operon      
Name: asr         
Operon arrangement:
Transcription unit        Promoter
asr
asr


Transcriptional Regulation      
Display Regulation             
Activated by: PhoB, RcdA, RstA
Repressed by: H-NS


RNA cis-regulatory element    
Attenuation: Translational


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References


Reference(s)    

 [1] Ramos-Morales F., 2012, Acidic pH: enemy or ally for enteric bacteria?, Virulence 3(2):103-6

 [2] Seputiene V., Motiej??nas D., Suziedelis K., Tomenius H., Normark S., Melefors O., Suziedeliene E., 2003, Molecular characterization of the acid-inducible asr gene of Escherichia coli and its role in acid stress response., J Bacteriol 185(8):2475-84


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