RegulonDB

Gene
Name:	ydiS
Synonym(s):	ECK1697, G6922, b1699
Genome position(nucleotides):	1781395 --> 1782684
Strand:	forward
Sequence:	Get nucleotide sequence FastaFormat
GC content %:	54.65
External database links:

ASAP:	ABE-0005671
ECHOBASE:	EB3735
ECOLIHUB:	ydiS
MIM:	231680
OU-MICROARRAY:	b1699
STRING:	511145.b1699
COLOMBOS:	ydiS

Product

Name:

putative electron transfer flavoprotein-quinone oxidoreductase YdiS

Synonym(s):

YdiS, putative oxidoreductase with FAD/NAD(P)-binding domain

Sequence:

Get amino acid sequence Fasta Format

Cellular location:

cytosol

Molecular weight:

45.923

Isoelectric point:

5.817

Motif(s):

Type	Positions	Sequence	Comment
	6 -> 185	FDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILADGVNSMLGRSLGMVPASDPHHYAVGV
	8 -> 22	AIVVGAGVAGSVAAL	UniProt: FAD.

Classification:

Multifun Terms (GenProtEC)
		1 - metabolism --> 1.1 - carbon utilization --> 1.1.2 - fatty acids
		1 - metabolism --> 1.4 - energy production/transport --> 1.4.3 - electron carriers
Gene Ontology Terms (GO)
	cellular_component	GO:0005829 - cytosol
	molecular_function	GO:0016491 - oxidoreductase activity GO:0071949 - FAD binding

Note(s):

Note(s): ...[more].

Evidence:

[COMP-HINF] Inferred by a human based on computational evidence

Reference(s):

[1] Campbell JW., et al., 2003
[2] Li H., et al., 2018
[3] Paradis-Bleau C., et al., 2014

External database links:

ALPHAFOLD:

ECOCYC:

ECOLIWIKI:

INTERPRO:

INTERPRO:

INTERPRO:

MODBASE:

PANTHER:

PFAM:

PRIDE:

REFSEQ:

SMR:

UNIPROT:

Operon

Name:

ydiQRST-fadK

Operon arrangement:

Transcription unit	Promoter
ydiQRST-fadK

RNA cis-regulatory element

Attenuation:	Translational

Elements in the selected gene context region unrelated to any object in RegulonDB

	Type	Name	Post Left	Post Right	Strand	Notes	Evidence (Confirmed, Strong, Weak)	References

Reference(s)
[1] Campbell JW., Morgan-Kiss RM., E Cronan J., 2003, A new Escherichia coli metabolic competency: growth on fatty acids by a novel anaerobic beta-oxidation pathway., Mol Microbiol 47(3):793-805
[2] Li H., Mao S., Chen H., Zhu L., Liu W., Wang X., Yin Y., 2018, To Construct an Engineered ( S)-Equol Resistant E. coli for in Vitro ( S)-Equol Production., Front Microbiol 9:1182
[3] Paradis-Bleau C., Kritikos G., Orlova K., Typas A., Bernhardt TG., 2014, A genome-wide screen for bacterial envelope biogenesis mutants identifies a novel factor involved in cell wall precursor metabolism., PLoS Genet 10(1):e1004056