RegulonDB RegulonDB 10.8: Gene Form
   

dsrA gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

Gene      
Name: dsrA    Texpresso search in the literature
Synonym(s): ECK1952, G7047, b1954
Genome position(nucleotides): 2025227 <-- 2025313 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
43.68
External database links:  
ASAP:
ABE-0006490
ECHOBASE:
EB4281
OU-MICROARRAY:
b1954
PortEco:
dsrA
COLOMBOS: dsrA


Product      
Name: DsrA
Synonym(s): DsrA small regulatory RNA; riboregulator of RpoS and H-NS production, small regulatory RNA DsrA
Type: small RNA
Classification:
Multifun Terms (GenProtEC)  
  2 - information transfer --> 2.2 - RNA related --> 2.2.7 - antisense RNA
  2 - information transfer --> 2.3 - protein related --> 2.3.2 - translation
  3 - regulation --> 3.1 - type of regulation --> 3.1.3 - posttranscriptional --> 3.1.3.6 - antisense RNA
  6 - cell structure --> 6.3 - surface antigens (ECA, O antigen of LPS)
Gene Ontology Terms (GO)  
biological_process GO:1900191 - negative regulation of single-species biofilm formation
GO:1902201 - negative regulation of bacterial-type flagellum-dependent cell motility
Note(s): Note(s): ...[more].
Evidence: [IDA] Inferred from direct assay
[IMP] Inferred from mutant phenotype
Reference(s): [1] Chen S., et al., 2002
[2] Malecka EM., et al., 2015
[3] Mihailovic MK., et al., 2018
[4] Peterman N., et al., 2014
[5] Sledjeski D., et al., 1995
External database links:  
ECOCYC:
DSRA-RNA
ECOLIWIKI:
b1954


Operon      
Name: dsrA         
Operon arrangement:
Transcription unit        Promoter
dsrA


Transcriptional Regulation      
Display Regulation             
Repressed by: LeuO


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



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