RegulonDB RegulonDB 10.9: Gene Form
   

yfbM gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

yfbL yfbN yfbM yfbKp7 yfbKp7

Gene      
Name: yfbM    Texpresso search in the literature
Synonym(s): ECK2266, G7179, b2272
Genome position(nucleotides): 2386934 --> 2387437 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
45.63
External database links:  
ASAP:
ABE-0007509
ECHOBASE:
EB3850
ECOLIHUB:
yfbM
OU-MICROARRAY:
b2272
STRING:
511145.b2272
COLOMBOS: yfbM


Product      
Name: DUF1877 domain-containing protein YfbM
Synonym(s): YfbM
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 19.019
Isoelectric point: 4.584
Motif(s):
 
Type Positions Sequence
1 -> 163 MGMIGYFAEIDSEKINQLLESTEKPLMDNIHDTLSGLRRLDIDKRWDFLHFGLTGTSAFDPAKNDPLSRAVLGEHSLEDGIDGFLGLTWNQELAATIDRLESLDRNELRKQFSIKRLNEMEIYPGVTFSEELEGQLFASIMLDMEKLISAYRRMLRQGNHALT

 

Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
G7179-MONOMER
ECOLIWIKI:
b2272
INTERPRO:
IPR015068
INTERPRO:
IPR035944
PDB:
1RYL
PFAM:
PF08974
PRIDE:
P76483
REFSEQ:
NP_416775
SMR:
P76483
UNIPROT:
P76483


Operon      
Name: yfbM         
Operon arrangement:
Transcription unit        Promoter
yfbM


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter yfbKp7 2385905 reverse Similarity to the consensus
Read more >
[ICWHO] [1]


Evidence    

 [ICWHO] Inferred computationally without human oversight



Reference(s)    

 [1] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78


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