RegulonDB RegulonDB 10.8: Gene Form
   

yfcU gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

yfcU yfcS yfcV

Gene      
Name: yfcU    Texpresso search in the literature
Synonym(s): ECK2331, ECK2332, G7209, b2337, b2338, b4661, yfcT
Type: Pseudo Gene
Genome position(nucleotides): 2452356 <-- 2455001 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 51.74
External database links:  
ASAP:
 ABE-0285125
ASAP:
 ABE-0007713
ECHOBASE:
 EB3876
ECHOBASE:
 EB4380
ECOLIWIKI:
 b2337
OU-MICROARRAY:
 b2337
OU-MICROARRAY:
 b2338
PortEco:
 yfcU
PortEco:
 yfcT
UNIPROT:
 P77196
COLOMBOS: yfcU


Product      
Name: putative outer membrane usher protein YfcU
Sequence: Get amino acid sequence Fasta Format
Isoelectric point: 4.495
Motif(s):
 
Type Positions Sequence
1 -> 29 MPDHSLFRLRILPWCIALAMSGSYSSVWA

 
Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
cellular_component GO:0009279 - cell outer membrane
molecular_function GO:0015473 - fimbrial usher porin activity
biological_process GO:0043711 - pilus organization
Note(s): Note(s): ...[more].
Reference(s): [1] Korea CG., et al., 2011
[2] Wurpel DJ., et al., 2013
External database links:  
ECOCYC:
 G7209-MONOMER
ECOLIWIKI:
 b2338
PFAM:
 PF13954
PFAM:
 PF00577
REFSEQ:
 YP_026167
UNIPROT:
 P77196


Operon      
Name: yfcUSRQPO         
Operon arrangement:
Transcription unit        Promoter
 


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References


Reference(s)    

 [1] Korea CG., Ghigo JM., Beloin C., 2011, The sweet connection: Solving the riddle of multiple sugar-binding fimbrial adhesins in Escherichia coli: Multiple E. coli fimbriae form a versatile arsenal of sugar-binding lectins potentially involved in surface-colonisation and tissue tropism., Bioessays 33(4):300-11

 [2] Wurpel DJ., Beatson SA., Totsika M., Petty NK., Schembri MA., 2013, Chaperone-usher fimbriae of Escherichia coli., PLoS One 8(1):e52835

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