RegulonDB

Gene
Name:	yfcU
Synonym(s):	ECK2331, ECK2332, G7209, b2337, b2338, b4661, yfcT
Type:	Pseudo Gene
Genome position(nucleotides):	2452356 <-- 2455001 Genome Browser
Strand:	reverse
Sequence:	Get nucleotide sequence FastaFormat
GC content %:	51.74
External database links:

ASAP:	ABE-0007713
ASAP:	ABE-0285125
ECHOBASE:	EB3876
ECHOBASE:	EB4380
ECOLIHUB:	yfcT
ECOLIHUB:	yfcU
ECOLIWIKI:	b2337
OU-MICROARRAY:	b2337
OU-MICROARRAY:	b2338
UNIPROT:	P77196
COLOMBOS:	yfcU

Product

Name:

putative outer membrane usher protein YfcU

Sequence:

Get amino acid sequence Fasta Format

Isoelectric point:

4.495

Motif(s):

Type	Positions	Sequence
	1 -> 29	MPDHSLFRLRILPWCIALAMSGSYSSVWA

Classification:

Multifun Terms (GenProtEC)
Gene Ontology Terms (GO)
	cellular_component	GO:0009279 - cell outer membrane GO:0016020 - membrane GO:0016021 - integral component of membrane
	molecular_function	GO:0015473 - fimbrial usher porin activity
	biological_process	GO:0009297 - pilus assembly GO:0043711 - pilus organization GO:0055085 - transmembrane transport

Note(s):

Note(s): ...[more].

Reference(s):

External database links:

ECOCYC:

ECOLIWIKI:

PFAM:

PFAM:

REFSEQ:

UNIPROT:

Operon

Name:

yfcUSRQPO

Operon arrangement:

Transcription unit	Promoter
yfcUSRQPO

Elements in the selected gene context region unrelated to any object in RegulonDB

	Type	Name	Post Left	Post Right	Strand	Notes	Evidence (Confirmed, Strong, Weak)	References

Reference(s)
[1] Korea CG., Ghigo JM., Beloin C., 2011, The sweet connection: Solving the riddle of multiple sugar-binding fimbrial adhesins in Escherichia coli: Multiple E. coli fimbriae form a versatile arsenal of sugar-binding lectins potentially involved in surface-colonisation and tissue tropism., Bioessays 33(4):300-11
[2] Morrow BJ., Graham JE., Curtiss R., 1999, Genomic subtractive hybridization and selective capture of transcribed sequences identify a novel Salmonella typhimurium fimbrial operon and putative transcriptional regulator that are absent from the Salmonella typhi genome., Infect Immun 67(10):5106-16
[3] Schneider D., Duperchy E., Coursange E., Lenski RE., Blot M., 2000, Long-term experimental evolution in Escherichia coli. IX. Characterization of insertion sequence-mediated mutations and rearrangements., Genetics 156(2):477-88
[4] Wurpel DJ., Beatson SA., Totsika M., Petty NK., Schembri MA., 2013, Chaperone-usher fimbriae of Escherichia coli., PLoS One 8(1):e52835