RegulonDB

Gene
Name:	yfdO
Synonym(s):	ECK2352, G7227, b2358, oweS
Genome position(nucleotides):	2472878 <-- 2473246 Genome Browser
Strand:	reverse
Sequence:	Get nucleotide sequence FastaFormat
GC content %:	56.1
External database links:

ASAP:	ABE-0007779
ECHOBASE:	EB3889
ECOLIHUB:	yfdO
ECOO157CYC:	Z0312
ECOO157CYC:	Z3356
ECOO157CYC:	Z1868
ECOO157CYC:	Z1450
OU-MICROARRAY:	b2358
STRING:	316407.85675372
COLOMBOS:	yfdO

Product

Name:

CPS-53 (KpLE1) prophage; protein YdfO

Synonym(s):

CPS-53 (KpLE1) prophage; putative defective phage replication protein O, OweS, YfdO

Sequence:

Get amino acid sequence Fasta Format

Cellular location:

cytosol

Molecular weight:

14.401

Isoelectric point:

7.819

Classification:

Multifun Terms (GenProtEC)
		5 - cell processes --> 5.5 - adaptations --> 5.5.6 - other (mechanical, nutritional, oxidative stress)
		8 - extrachromosomal --> 8.1 - prophage genes and phage related functions
Gene Ontology Terms (GO)
	cellular_component	GO:0005829 - cytosol
	biological_process	GO:0006979 - response to oxidative stress

Note(s):

Note(s): ...[more].

External database links:

ECOCYC:

ECOLIWIKI:

ECOO157CYC:

ECOO157CYC:

ECOO157CYC:

ECOO157CYC:

PRIDE:

REFSEQ:

SMR:

UNIPROT:

Operon

Name:

yfdONMLK

Operon arrangement:

Transcription unit	Promoter
yfdONMLK

Elements in the selected gene context region unrelated to any object in RegulonDB

Type	Name	Post Left	Strand	Notes	Evidence (Confirmed, Strong, Weak)	References
promoter	yfdPp5	2473422	forward	nd	[ICWHO]	[1]
promoter	yfdPp6	2473536	forward	nd	[ICWHO]	[1]
promoter	yfdPp9	2473572	forward	nd	[ICWHO]	[1]

Evidence
[ICWHO] Inferred computationally without human oversight

Reference(s)
[1] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78