Gene
Name:	zipA
Synonym(s):	ECK2407, G7258, b2412
Genome position(nucleotides):	2530247 <-- 2531233 Genome Browser
Strand:	reverse
Sequence:	Get nucleotide sequence FastaFormat
GC content %:	55.12
External database links:

ASAP:	ABE-0007942
ECHOBASE:	EB3921
OU-MICROARRAY:	b2412
PortEco:	zipA
STRING:	511145.b2412
COLOMBOS:	zipA

Type	Name	Post Left	Strand	Notes	Evidence (Confirmed, Strong, Weak)	References
promoter	TSS_2689	2530551	reverse	nd	[RS-EPT-CBR]	[6]
promoter	cysZp1	2531383	forward	Similarity to the consensus sequence of the set of known functional promoters for this sigma factor with strong experimental evidence: poor homology. Score: -3.06. P-value: 7.485e-5 Read more >	[ICWHO]	[7]
promoter	zipAp9	2531407	reverse	Similarity to the consensus sequence of the set of known functional promoters for this sigma factor with strong experimental evidence: good homology. Score: 3.644. P-value: 5.657e-5 Read more >	[ICWHO]	[7]
promoter	TSS_2690	2531424	forward	nd	[RS-EPT-CBR]	[6]

Evidence
[RS-EPT-CBR] RNA-seq using two enrichment strategies for primary transcripts and consistent biological replicates
[ICWHO] Inferred computationally without human oversight

Reference(s)
[1] Hale CA., de Boer PA., 1997, Direct binding of FtsZ to ZipA, an essential component of the septal ring structure that mediates cell division in E. coli., Cell 88(2):175-85
[2] Lopez-Montero I., Mateos-Gil P., Sferrazza M., Navajas PL., Rivas G., Velez M., Monroy F., 2012, Active membrane viscoelasticity by the bacterial FtsZ-division protein., Langmuir 28(10):4744-53
[3] Mateos-Gil P., Marquez I., Lopez-Navajas P., Jimenez M., Vicente M., Mingorance J., Rivas G., Velez M., 2012, FtsZ polymers bound to lipid bilayers through ZipA form dynamic two dimensional networks., Biochim Biophys Acta 1818(3):806-13
[4] Navajas PL., Rivas G., Mingorance J., Mateos-Gil P., Horger I., Velasco E., Tarazona P., Velez M., 2008, In vitro reconstitution of the initial stages of the bacterial cell division machinery., J Biol Phys 34(1-2):237-47
[5] Vega DE., Margolin W., 2018, Suppression of a Thermosensitive zipA Cell Division Mutant by Altering Amino Acid Metabolism., J Bacteriol 200(2)
[6] Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muñiz-Rascado L, García-Sotelo JS, Weiss V, Solano-Lira H, Martínez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernández S, Alquicira-Hernández K, López-Fuentes A, Porrón-Sotelo L, Huerta AM, Bonavides-Martínez C, Balderas-Martínez YI, Pannier L, Olvera M, Labastida A, Jiménez-Jacinto V, Vega-Alvarado L, Del Moral-Chávez V, Hernández-Alvarez A, Morett E, Collado-Vides J., 2012, RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more., Nucleic Acids Res.
[7] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78