RegulonDB RegulonDB 10.9: Gene Form
   

ypfH gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

tmcA ypfH ypfN

Gene      
Name: ypfH    Texpresso search in the literature
Synonym(s): ECK2469, G7296, b2473
Genome position(nucleotides): 2593072 <-- 2593770 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
53.93
External database links:  
ASAP:
ABE-0008145
ECHOBASE:
EB3947
ECOLIHUB:
ypfH
OU-MICROARRAY:
b2473
STRING:
511145.b2473
COLOMBOS: ypfH


Product      
Name: esterase YpfH
Synonym(s): YpfH
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 24.855
Isoelectric point: 4.571
Motif(s):
 
Type Positions Sequence
4 -> 209 DHFVVQSPDKPAQQLLLLFHGVGDNPVAMGEIGNWFAPLFPDALVVSVGGAEPSGNPAGRQWFSVQGITEDNRQARVDAIMPTFIETVRYWQKQSGVGANATALIGFSQGAIMVLESIKAEPGLASRVIAFNGRYASLPETASTATTIHLIHGGEDPVIDLAHAVAAQEALISAGGDVTLDIVEDLGHAIDNRSMQFALDHLRYTI

 

Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
molecular_function GO:0016788 - hydrolase activity, acting on ester bonds
GO:0016787 - hydrolase activity
GO:0052689 - carboxylic ester hydrolase activity
Note(s): Note(s): ...[more].
Evidence: [APPH] Assay of protein purified to homogeneity
Reference(s): [1] Kuznetsova E., et al., 2005
External database links:  
ECOCYC:
G7296-MONOMER
ECOLIWIKI:
b2473
INTERPRO:
IPR003140
INTERPRO:
IPR029058
MODBASE:
P76561
PFAM:
PF02230
PRIDE:
P76561
REFSEQ:
NP_416968
SMR:
P76561
UNIPROT:
P76561


Operon      
Name: ypfH         
Operon arrangement:
Transcription unit        Promoter
ypfH


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References


Reference(s)    

 [1] Kuznetsova E., Proudfoot M., Sanders SA., Reinking J., Savchenko A., Arrowsmith CH., Edwards AM., Yakunin AF., 2005, Enzyme genomics: Application of general enzymatic screens to discover new enzymes., FEMS Microbiol Rev 29(2):263-79


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