RegulonDB RegulonDB 10.9: Gene Form
   

yfjW gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

yfjW yfjV yfjX yfjU ypjI yfjXp2 yfjXp2 yfjWp5 yfjWp5

Gene      
Name: yfjW    Texpresso search in the literature
Synonym(s): ECK2638, G7377, b2642
Genome position(nucleotides): 2773318 --> 2775021 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
31.22
External database links:  
ASAP:
ABE-0008699
ECHOBASE:
EB3001
ECOLIHUB:
yfjW
OU-MICROARRAY:
b2642
STRING:
511145.b2642
COLOMBOS: yfjW


Product      
Name: CP4-57 prophage; uncharacterized protein YfjW
Synonym(s): CP4-57 prophage; putative inner membrane protein, YfjW
Sequence: Get amino acid sequence Fasta Format
Cellular location: inner membrane
Molecular weight: 64.196
Isoelectric point: 8.873
Motif(s):
 
Type Positions Sequence
235 -> 235 K
528 -> 548 IFGSSIMDILKYIFGLGLLAI
20 -> 40 FTILAFFYISSIFFLLCSGVL
69 -> 89 SLETAWYLISAVAVFIASVFI
126 -> 146 ILLNILYNLFGAILLSLFMCL

 

Classification:
Multifun Terms (GenProtEC)  
  8 - extrachromosomal --> 8.1 - prophage genes and phage related functions
Gene Ontology Terms (GO)  
cellular_component GO:0016020 - membrane
GO:0005886 - plasma membrane
GO:0016021 - integral component of membrane
Note(s): Note(s): ...[more].
External database links:  
DIP:
DIP-12088N
ECOCYC:
G7377-MONOMER
ECOLIWIKI:
b2642
PRIDE:
P52138
REFSEQ:
NP_417129
UNIPROT:
P52138


Operon      
Name: yfjW         
Operon arrangement:
Transcription unit        Promoter
yfjW


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter yfjWp5 2773285 forward Similarity to the consensus
Read more >
[ICWHO] [1]
  promoter yfjXp2 2775888 forward Similarity to the consensus
Read more >
[ICWHO] [1]


Evidence    

 [ICWHO] Inferred computationally without human oversight



Reference(s)    

 [1] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78


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