RegulonDB

Gene
Name:	yfjX
Synonym(s):	ECK2639, G7378, b2643
Genome position(nucleotides):	2775919 --> 2776377 Genome Browser
Strand:	forward
Sequence:	Get nucleotide sequence FastaFormat
GC content %:	54.03
External database links:

ASAP:	ABE-0008704
ECHOBASE:	EB3002
ECOLIHUB:	yfjX
ECOO157CYC:	Z1656
OU-MICROARRAY:	b2643
STRING:	511145.b2643
COLOMBOS:	yfjX

Product

Name:

CP4-57 prophage; putative antirestriction protein YfjX

Synonym(s):

YfjX

Sequence:

Get amino acid sequence Fasta Format

Cellular location:

cytosol

Molecular weight:

17.303

Isoelectric point:

4.253

Motif(s):

Type	Positions	Sequence
	60 -> 152	EYCGGIWSFYTLSNGGAFMAPDADGDDKWHLLNGMNGNGAEMSAEAAGIAVCLIEYSHHACLTECDAMTEHYYRLRDYALQHPESSAIMRIID

Classification:

Multifun Terms (GenProtEC)
Multifun Terms (GenProtEC)		8 - extrachromosomal --> 8.1 - prophage genes and phage related functions
Gene Ontology Terms (GO)
Gene Ontology Terms (GO)	cellular_component	GO:0005829 - cytosol

Note(s):

Note(s): ...[more].

External database links:

ECOCYC:

ECOLIWIKI:

ECOO157CYC:

INTERPRO:

INTERPRO:

PFAM:

PRIDE:

REFSEQ:

SMR:

UNIPROT:

Operon

Name:

yfjXY-ypjJ-yfjZ-ypjF

Operon arrangement:

Transcription unit	Promoter
yfjXY-ypjJ-yfjZ-ypjF

Elements in the selected gene context region unrelated to any object in RegulonDB

	Type	Name	Post Left	Post Right	Strand	Notes	Evidence (Confirmed, Strong, Weak)	References
	promoter	yfjXp2	2775888		forward	Similarity to the consensus sequence of the set of known functional promoters for this sigma factor with strong experimental evidence: good homology. Score: 4.385. P-value: 1.670e-5 Read more >	[ICWHO]	[1]

Evidence
[ICWHO] Inferred computationally without human oversight

Reference(s)
[1] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78