RegulonDB

Gene
Name:	yqeH
Synonym(s):	ECK2844, G7466, b2846
Genome position(nucleotides):	2987536 --> 2988168 Genome Browser
Strand:	forward
Sequence:	Get nucleotide sequence FastaFormat
GC content %:	37.44
External database links:

ASAP:	ABE-0009349
ECHOBASE:	EB2902
ECOLIHUB:	yqeH
OU-MICROARRAY:	b2846
STRING:	511145.b2846
COLOMBOS:	yqeH

Product

Name:

putative LuxR family transcriptional regulator YqeH

Synonym(s):

YqeH

Sequence:

Get amino acid sequence Fasta Format

Cellular location:

cytosol

Molecular weight:

24.287

Isoelectric point:

7.38

Motif(s):

Type	Positions	Sequence
	151 -> 195	TLTQMEFTIMGYMVSGYNPYQIAEVLDMDIRSIYAYKQRIEKRMG

Classification:

Multifun Terms (GenProtEC)
Gene Ontology Terms (GO)
	cellular_component	GO:0005829 - cytosol
	molecular_function	GO:0003677 - DNA binding
	biological_process	GO:0006355 - regulation of transcription, DNA-templated

Note(s):

Note(s): ...[more].

External database links:

ECOCYC:

ECOLIWIKI:

INTERPRO:

INTERPRO:

PFAM:

PRIDE:

REFSEQ:

SMR:

UNIPROT:

Operon

Name:

yqeH

Operon arrangement:

Transcription unit	Promoter
yqeH

Elements in the selected gene context region unrelated to any object in RegulonDB

Type	Name	Post Left	Strand	Notes	Evidence (Confirmed, Strong, Weak)	References
promoter	yqeHp5	2987508	forward	Similarity to the consensus sequence of the set of known functional promoters for this sigma factor with strong experimental evidence: high homology. Score: 4.1. P-value: 1.589e-5 Read more >	[ICWHO]	[1]
promoter	yqeHp4	2987513	forward	Similarity to the consensus sequence of the set of known functional promoters for this sigma factor with strong experimental evidence: good homology. Score: 3.504. P-value: 1.670e-5 Read more >	[ICWHO]	[1]
promoter	yqeIp1	2988344	forward	Similarity to the consensus sequence of the set of known functional promoters for this sigma factor with strong experimental evidence: good homology. Score: 2.576. P-value: 6.573e-5 Read more >	[ICWHO]	[1]
promoter	yqeIp8	2988415	forward	Similarity to the consensus sequence of the set of known functional promoters for this sigma factor with strong experimental evidence: poor homology. Score: 5.406. P-value: 1.250e-5 Read more >	[ICWHO]	[1]
promoter	yqeIp7	2988423	forward	Similarity to the consensus sequence of the set of known functional promoters for this sigma factor with strong experimental evidence: high homology. Score: 4.9. P-value: 1.542e-5 Read more >	[ICWHO]	[1]
promoter	yqeIp6	2988431	forward	Similarity to the consensus sequence of the set of known functional promoters for this sigma factor with strong experimental evidence: high homology. Score: 4.203. P-value: 5.714e-5 Read more >	[ICWHO]	[1]
promoter	yqeIp5	2988436	forward	Similarity to the consensus sequence of the set of known functional promoters for this sigma factor with strong experimental evidence: good homology. Score: 3.94. P-value: 8.356e-5 Read more >	[ICWHO]	[1]

Evidence
[ICWHO] Inferred computationally without human oversight

Reference(s)
[1] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78