RegulonDB RegulonDB 10.10: Gene Form
   

yjfZ gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

yjfZ ytfB rplI ytfA yjfZp7 yjfZp7 yjfZp8 yjfZp8

Gene      
Name: yjfZ    Texpresso search in the literature
Synonym(s): ECK4200, G7862, b4204
Genome position(nucleotides): 4426628 <-- 4427422 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
42.39
External database links:  
ASAP:
ABE-0013748
ECHOBASE:
EB2393
ECOLIHUB:
yjfZ
OU-MICROARRAY:
b4204
COLOMBOS: yjfZ


Product      
Name: DUF2686 domain-containing protein YjfZ
Synonym(s): YjfZ
Sequence: Get amino acid sequence Fasta Format
Cellular location: membrane
Molecular weight: 29.739
Isoelectric point: 6.707
Motif(s):
 
Type Positions Sequence
5 -> 264 TTIYSFPAYLSRFSSTDKPVKLKFHQYARATLLSNRGRDHNCDGRRTVEIHKLDLSDWQAFNKLATRCNAYDGITMNGDNSFGWNHEATLDNIHAQKYNKAYAGARLTAELKYLLQDVESFEPNSKYTIHEVVLGPGYGTPDYTGQTIGYVVTLPAQMPNCWSSELPTIDLYIDQLRTVTGVSNALGFIIAALLNAYSDLPHDLKIGLRSLSSSAAIYSGLGFERVPQERDISCARMYLTPANHPDLWTQENGEWIYLRN
182 -> 198 TVTGVSNALGFIIAALL

 

Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
cellular_component GO:0016020 - membrane
GO:0016021 - integral component of membrane
Note(s): Note(s): ...[more].
External database links:  
DIP:
DIP-12598N
ECOCYC:
G7862-MONOMER
ECOLIWIKI:
b4204
INTERPRO:
IPR021220
PFAM:
PF10887
PRIDE:
P39308
REFSEQ:
NP_418625
SMR:
P39308
UNIPROT:
P39308


Operon      
Name: yjfZ         
Operon arrangement:
Transcription unit        Promoter
yjfZ


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter yjfZp8 4427517 reverse nd [ICWHO] [1]
  promoter yjfZp7 4427526 reverse nd [ICWHO] [1]


Evidence    

 [ICWHO] Inferred computationally without human oversight



Reference(s)    

 [1] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78


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