RegulonDB RegulonDB 11.1: Gene Form
   

ytfK gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

paeA ytfJ ytfK PhoB PhoB CRP ytfKp1 ytfKp1 ytfKp2 ytfKp2 ytfJp ytfJp

Gene      
Name: ytfK    Texpresso search in the literature
Synonym(s): ECK4213, G7872, b4217
Genome position(nucleotides): 4439587 --> 4439793
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 43.48
External database links:  
ASAP:
 ABE-0013797
ECHOBASE:
 EB2404
ECOLIHUB:
 ytfK
OU-MICROARRAY:
 b4217
STRING:
 511145.b4217
COLOMBOS: ytfK


Product      
Name: stringent response modulator YtfK
Synonym(s): DUF1107 domain-containing protein YtfK, YtfK
Sequence: Get amino acid sequence Fasta Format
Molecular weight: 8.072
Isoelectric point: 10.789
Motif(s):
 
Type Positions Sequence Comment
1 -> 63 MKIFQRYNPLQVAKYVKILFRGRLYIKDVGAFEFDKGKILIPKVKDKLHLSVMSEVNRQVMRL

 
Classification:
Multifun Terms (GenProtEC)  
  5 - cell processes --> 5.5 - adaptations --> 5.5.3 - starvation
Gene Ontology Terms (GO)  
molecular_function GO:0005515 - protein binding
biological_process GO:0006979 - response to oxidative stress
GO:0016036 - cellular response to phosphate starvation
GO:0015968 - stringent response
Note(s): Note(s): ...[more].
External database links:  
ALPHAFOLD:
 P0ADE2
ECOCYC:
 G7872-MONOMER
ECOLIWIKI:
 b4217
INTERPRO:
 IPR009491
PFAM:
 PF06526
PRIDE:
 P0ADE2
REFSEQ:
 NP_418638
SMR:
 P0ADE2
UNIPROT:
 P0ADE2


Operon      
Name: ytfK         
Operon arrangement:
Transcription unit        Promoter
ytfK
ytfK


Transcriptional Regulation      
Display Regulation             
Activated by: CRP, PhoB


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



RegulonDB