RegulonDB RegulonDB 10.10: Gene Form
   

yohP gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

mdtQ dusC yohF yohP terminator TSS_2453 TSS_2453

Gene      
Name: yohP    Texpresso search in the literature
Synonym(s): ECK4494, G0-10652, b4679
Genome position(nucleotides): 2228982 --> 2229065 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 34.52
External database links:  
ASAP:
 ABE-0285222
ECOLIHUB:
 yohP
STRING:
 511145.b4679
COLOMBOS: yohP


Product      
Name: uncharacterized membrane protein YohP
Synonym(s): YohP
Sequence: Get amino acid sequence Fasta Format
Cellular location: inner membrane
Molecular weight: 3.092
Isoelectric point: 10.804
Motif(s):
 
Type Positions Sequence
2 -> 23 KIILWAVLIIFLIGLLVVTGVF

 
Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
cellular_component GO:0016020 - membrane
GO:0005886 - plasma membrane
GO:0005887 - integral component of plasma membrane
GO:0016021 - integral component of membrane
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
 MONOMER0-2879
PRIDE:
 C1P609
REFSEQ:
 YP_002791249
UNIPROT:
 C1P609


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter TSS_2453 2227296 reverse nd [RS-EPT-CBR] [1]


Evidence    

 [RS-EPT-CBR] RNA-seq using two enrichment strategies for primary transcripts and consistent biological replicates


Reference(s)    

 [1] Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muñiz-Rascado L, García-Sotelo JS, Weiss V, Solano-Lira H, Martínez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernández S, Alquicira-Hernández K, López-Fuentes A, Porrón-Sotelo L, Huerta AM, Bonavides-Martínez C, Balderas-Martínez YI, Pannier L, Olvera M, Labastida A, Jiménez-Jacinto V, Vega-Alvarado L, Del Moral-Chávez V, Hernández-Alvarez A, Morett E, Collado-Vides J., 2012, RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more., Nucleic Acids Res.

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