RegulonDB RegulonDB 11.1: Gene Form
   

ECK125135295 gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

ynfM ynfL asr unknown PhoB RcdA RstA RcdA terminator asrp2 asrp2 asrp asrp ynfMp ynfMp ynfLp6 ynfLp6 ynfMp5 ynfMp5 ynfMp4 ynfMp4

Gene      
Synonym(s): G0-10698
Type: Phantom Gene
Genome position(nucleotides): 1670949 <-- 1671136
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 45.21
Note(s): This small RNA was identified by RNA-Seq Raghavan R,2011.


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter ynfMp4 1669630 forward nd [COMP-AINF] [1]
  promoter ynfMp5 1669633 forward nd [COMP-AINF] [1]
  promoter ynfLp6 1669652 reverse nd [COMP-AINF] [1]


Evidence    

 [COMP-AINF] Inferred computationally without human oversight


Reference(s)    

 [1] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78

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