RegulonDB RegulonDB 10.8: Gene Form
   

yeeH gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

insH6 cobU yeeH cobS anti-anti-terminator anti-terminator terminator TSS_2305 TSS_2305 cobUp2 cobUp2 cobUp1 cobUp1 TSS_2304 TSS_2304

Gene      
Name: yeeH    Texpresso search in the literature
Synonym(s): ECK4437, G0-16658, b4639
Type: Pseudo Gene
Genome position(nucleotides): 2066068 <-- 2066154 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
41.38
Note(s): Comment in EcoGene: Pseudogene, internal fragment. Defective remnant in ISW.


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter TSS_2304 2065847 reverse nd [RS-EPT-CBR] [1]
  promoter TSS_2305 2065996 reverse nd [RS-EPT-CBR] [1]


Evidence    

 [RS-EPT-CBR] RNA-seq using two enrichment strategies for primary transcripts and consistent biological replicates



Reference(s)    

 [1] Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muñiz-Rascado L, García-Sotelo JS, Weiss V, Solano-Lira H, Martínez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernández S, Alquicira-Hernández K, López-Fuentes A, Porrón-Sotelo L, Huerta AM, Bonavides-Martínez C, Balderas-Martínez YI, Pannier L, Olvera M, Labastida A, Jiménez-Jacinto V, Vega-Alvarado L, Del Moral-Chávez V, Hernández-Alvarez A, Morett E, Collado-Vides J., 2012, RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more., Nucleic Acids Res.


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