RegulonDB RegulonDB 10.9: Gene Form
   

sokE gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

ybdK hokE sokE LexA hokEp hokEp ybdKp3 ybdKp3 ybdJp3 ybdJp3 ybdJp2 ybdJp2

Gene      
Name: sokE    Texpresso search in the literature
Synonym(s): ECK4512, G0-16677, b4700
Genome position(nucleotides): 607734 --> 607792 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
52.54


Product      
Name: small RNA SokE
Synonym(s): SokE
Type: small RNA
Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
RNA0-391


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter ybdJp2 606405 reverse Similarity to the consensus
Read more >
[ICWHO] [1]
  promoter ybdJp3 606411 reverse Similarity to the consensus
Read more >
[ICWHO] [1]
  promoter ybdKp3 607561 reverse Similarity to the consensus
Read more >
[ICWHO] [1]


Evidence    

 [ICWHO] Inferred computationally without human oversight



Reference(s)    

 [1] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78


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